RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 PPP3CCP48454 512 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 ZNF252P-AS1Q0IIN9 211 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 LMAN2Q12907 356 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 MYO1EQ12965 1108 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 EML3Q32P44 896 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 HSF5Q4G112 596 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 PMS2CLQ68D20 193 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 TCEAL6Q6IPX3 200 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 VSTM1Q6UX27 236 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 CRELD2Q6UXH1 353 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 SFR1Q86XK3 245 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 BRSK2Q8IWQ3 736 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 ADGRF2Q8IZF7 708 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 SYCP3Q8IZU3 236 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 CSGALNACT2Q8N6G5 542 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 ARL14EPQ8N8R7 260 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 TCEAL3Q969E4 200 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 SPACA7Q96KW9 195 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 CNOT6LQ96LI5 555 aaKnown RBP11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 CYP2S1Q96SQ9 504 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 GZF1Q9H116 711 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 NUP62CLQ9H1M0 184 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 GDAP2Q9NXN4 497 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 FAM13BQ9NYF5 915 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 RBAKQ9NYW8 714 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 TRPM5Q9NZQ8 1165 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 MAGEC2Q9UBF1 373 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 GTF3C4Q9UKN8 822 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 CACNA1GO43497 2377 aa11.48□□□□□ -0.57
CSNK1D-226ENST00000585026 MYH11P35749 1972 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 GREB1Q4ZG55 1949 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 DCLK1O15075 740 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 KIAA0391O15091 583 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 TADA3O75528 432 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 ACAT1P24752 427 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 ADSSP30520 456 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 SYKP43405 635 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 MRPS21P82921 87 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 BYSLQ13895 437 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 SH3PXD2AQ5TCZ1 1133 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 ANO7Q6IWH7 933 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 UNQ6494/PRO21346Q6UXR6 183 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 USP49Q70CQ1 688 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 SV2BQ7L1I2 683 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 C1orf127Q8N9H9 656 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 ANKRD36BP1Q96IX9 119 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 SPATA17Q96L03 361 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 SLC32A1Q9H598 525 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 POLMQ9NP87 494 aaPredicted RBP11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 POLR3BQ9NW08 1133 aaPredicted RBP11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 GCNT4Q9P109 453 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 USP25Q9UHP3 1055 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 CDH9Q9ULB4 789 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 SPAG17Q6Q759 2223 aa11.47□□□□□ -0.57
CSNK1D-226ENST00000585026 LNP1A1A4G5 178 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 GABRDO14764 452 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 TRIM66O15016 1216 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 MAP3K13O43283 966 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 PPP1R37O75864 691 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 GCNT3O95395 438 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 TNNC2P02585 160 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 RDXP35241 583 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 GRIK1P39086 918 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 DHPSP49366 369 aaPredicted RBP11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 FOXC1Q12948 553 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 SURF1Q15526 300 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 CRY1Q16526 586 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 PREPLQ4J6C6 727 aaPredicted RBP11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 C2orf27AQ580R0 203 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 EOGTQ5NDL2 527 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 RRAGBQ5VZM2 374 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 LRSAM1Q6UWE0 723 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 STXBP4Q6ZWJ1 553 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 LPCAT2Q7L5N7 544 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 RASSF3Q86WH2 238 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 TTC30AQ86WT1 665 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 DDX42Q86XP3 938 aaKnown RBP eCLIP11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 STKLD1Q8NE28 680 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 RIN3Q8TB24 985 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 SAAL1Q96ER3 474 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 EPSTI1Q96J88 318 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 PKMYT1Q99640 499 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 NUSAP1Q9BXS6 441 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 TPSD1Q9BZJ3 242 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 TNMDQ9H2S6 317 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 EVLQ9UI08 416 aaPredicted RBP11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 MMP17Q9ULZ9 603 aa11.46□□□□□ -0.57
CSNK1D-226ENST00000585026 C2orf78A6NCI8 922 aa11.45□□□□□ -0.58
CSNK1D-226ENST00000585026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.45□□□□□ -0.58
CSNK1D-226ENST00000585026 APODP05090 189 aa11.45□□□□□ -0.58
CSNK1D-226ENST00000585026 IDEP14735 1019 aa11.45□□□□□ -0.58
CSNK1D-226ENST00000585026 EIF2DP41214 584 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-226ENST00000585026 SEC13P55735 322 aa11.45□□□□□ -0.58
CSNK1D-226ENST00000585026 SPDYCQ5MJ68 293 aa11.45□□□□□ -0.58
CSNK1D-226ENST00000585026 NAIF1Q69YI7 327 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms