RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 LOXL3P58215 753 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 HOXA4Q00056 320 aaPredicted RBP3.69□□□□□ -1.82
VAPA-208ENST00000584796 SP2Q02086 613 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 LAMB3Q13751 1172 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 PTPN21Q16825 1174 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 EMC10Q5UCC4 262 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 AWAT2Q6E213 333 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 CHSY1Q86X52 802 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 KRT73Q86Y46 540 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 MIER2Q8N344 545 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 CPA6Q8N4T0 437 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 C8orf58Q8NAV2 365 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 FAM46DQ8NEK8 389 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 RP9Q8TA86 221 aaKnown RBP3.69□□□□□ -1.82
VAPA-208ENST00000584796 FAM167AQ96KS9 214 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 SLC46A1Q96NT5 459 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 MACROD1Q9BQ69 325 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 TMEM79Q9BSE2 394 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 WACQ9BTA9 647 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 ANLNQ9NQW6 1124 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 TUBA8Q9NY65 449 aaPredicted RBP3.69□□□□□ -1.82
VAPA-208ENST00000584796 ELOVL5Q9NYP7 299 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 ADAMTS5Q9UNA0 930 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 RNF17Q9BXT8 1623 aaKnown RBP3.69□□□□□ -1.82
VAPA-208ENST00000584796 ABCC1P33527 1531 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 PLCH2O75038 1416 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 TRAPPC8Q9Y2L5 1435 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 FNDC1Q4ZHG4 1894 aaPredicted RBP3.69□□□□□ -1.82
VAPA-208ENST00000584796 TNKSO95271 1327 aa3.69□□□□□ -1.82
VAPA-208ENST00000584796 H7C1Q1 480 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 ERC2O15083 957 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 DTNBO60941 627 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 AHSGP02765 367 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 FTLP02792 175 aaPredicted RBP3.68□□□□□ -1.82
VAPA-208ENST00000584796 FESP07332 822 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 ENGP17813 658 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 PDCP20941 246 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 NR4A2P43354 598 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 DAZAP2Q15038 168 aaPredicted RBP3.68□□□□□ -1.82
VAPA-208ENST00000584796 LONRF3Q496Y0 759 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 CRELD2Q6UXH1 353 aaPredicted RBP3.68□□□□□ -1.82
VAPA-208ENST00000584796 NAPRTQ6XQN6 538 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 CYP2W1Q8TAV3 490 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 ATG4AQ8WYN0 398 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 RITA1Q96K30 269 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 C5orf34Q96MH7 638 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 ASB2Q96Q27 587 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 PTDSS2Q9BVG9 487 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 SPRTNQ9H040 489 aaPredicted RBP3.68□□□□□ -1.82
VAPA-208ENST00000584796 VPS16Q9H269 839 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 LMBRD1Q9NUN5 540 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 SERTAD3Q9UJW9 196 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 AGLP35573 1532 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 IQGAP1P46940 1657 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 PLXNC1O60486 1568 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 SAMD9LQ8IVG5 1584 aa3.68□□□□□ -1.82
VAPA-208ENST00000584796 KCNU1A8MYU2 1149 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 BCAR3O75815 825 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 NPSP0C0P6 89 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 MMP13P45452 471 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 PXNP49023 591 aaPredicted RBP3.67□□□□□ -1.82
VAPA-208ENST00000584796 MAP2K6P52564 334 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 GTF2H3Q13889 308 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 ARHGAP40Q5TG30 622 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 KIRREL2Q6UWL6 708 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 TRIM72Q6ZMU5 477 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 ZNF517Q6ZMY9 492 aaPredicted RBP3.67□□□□□ -1.82
VAPA-208ENST00000584796 Q6ZWC4 215 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 USP45Q70EL2 814 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 PARS2Q7L3T8 475 aaKnown RBP3.67□□□□□ -1.82
VAPA-208ENST00000584796 LRRC71Q8N4P6 559 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 AFAP1Q8N556 730 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 PNLDC1Q8NA58 520 aaKnown RBP3.67□□□□□ -1.82
VAPA-208ENST00000584796 HMCESQ96FZ2 354 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 ZC3H10Q96K80 434 aaKnown RBP3.67□□□□□ -1.82
VAPA-208ENST00000584796 CAMKK2Q96RR4 588 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 THAP7Q9BT49 309 aaPredicted RBP3.67□□□□□ -1.82
VAPA-208ENST00000584796 TTYH3Q9C0H2 523 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 GLOD4Q9HC38 313 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 GABRQQ9UN88 632 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 ROBO1Q9Y6N7 1651 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 INO80Q9ULG1 1556 aaPredicted RBP3.67□□□□□ -1.82
VAPA-208ENST00000584796 SHANK2Q9UPX8 1470 aa3.67□□□□□ -1.82
VAPA-208ENST00000584796 EP400Q96L91 3159 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 ARHGAP5Q13017 1502 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 LRRC7Q96NW7 1537 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 A1L4Q6 167 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 E5RJQ4 531 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 ARHGAP25P42331 645 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 PDE1AP54750 535 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 LILRA4P59901 499 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 NKX6-1P78426 367 aaPredicted RBP3.66□□□□□ -1.82
VAPA-208ENST00000584796 EXOSC9Q06265 439 aaKnown RBP3.66□□□□□ -1.82
VAPA-208ENST00000584796 FHL1Q13642 323 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 IQCB1Q15051 598 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 TRIP6Q15654 476 aaKnown RBP3.66□□□□□ -1.82
VAPA-208ENST00000584796 LAYNQ6UX15 382 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 PRPF38AQ8NAV1 312 aaKnown RBP3.66□□□□□ -1.82
VAPA-208ENST00000584796 WASF1Q92558 559 aa3.66□□□□□ -1.82
VAPA-208ENST00000584796 GLG1Q92896 1179 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms