RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 KRT82Q9NSB4 513 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 USP34Q70CQ2 3546 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 MANSC4A6NHS7 340 aaPredicted RBP10.79□□□□□ -0.68
RFFL-212ENST00000584655 KCNN4O15554 427 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 MCM3P25205 808 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 SESN2P58004 480 aaPredicted RBP10.79□□□□□ -0.68
RFFL-212ENST00000584655 SOWAHAQ2M3V2 549 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 FAM228AQ86W67 206 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 OLIG1Q8TAK6 271 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 ZNF518BQ9C0D4 1074 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 TMEM134Q9H6X4 195 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 RAB21Q9UL25 225 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 TRDMT1O14717 391 aaKnown RBP10.79□□□□□ -0.68
RFFL-212ENST00000584655 P4HA2O15460 535 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 NEBLO76041 1014 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 SSTR1P30872 391 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 GMPRP36959 345 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 CXCR3P49682 368 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 AP1B1Q10567 949 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 PDIA2Q13087 525 aaKnown RBP10.79□□□□□ -0.68
RFFL-212ENST00000584655 MON1BQ7L1V2 547 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 RPGRIP1Q96KN7 1286 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 RAB17Q9H0T7 212 aa10.79□□□□□ -0.68
RFFL-212ENST00000584655 ADGRA2Q96PE1 1338 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 SLC15A5A6NIM6 579 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 MSI1O43347 362 aaKnown RBP10.78□□□□□ -0.68
RFFL-212ENST00000584655 AP1G2O75843 785 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 TKTP29401 623 aaKnown RBP10.78□□□□□ -0.68
RFFL-212ENST00000584655 PMS2P54278 862 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 EIF3EP60228 445 aaKnown RBP10.78□□□□□ -0.68
RFFL-212ENST00000584655 EFTUD2Q15029 972 aaKnown RBP eCLIP10.78□□□□□ -0.682e-9■■■□□ 16
RFFL-212ENST00000584655 DDR2Q16832 855 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 HOOK3Q86VS8 718 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 MICALL1Q8N3F8 863 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 FAM193BQ96PV7 902 aaPredicted RBP10.78□□□□□ -0.68
RFFL-212ENST00000584655 NAP1L3Q99457 506 aaPredicted RBP10.78□□□□□ -0.68
RFFL-212ENST00000584655 RNF208Q9H0X6 261 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 RASSF4Q9H2L5 321 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 ST6GALNAC4Q9H4F1 302 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 USP18Q9UMW8 372 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 PHIPQ8WWQ0 1821 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 MYO15AQ9UKN7 3530 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 A0A1B0GUA9 196 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 M0QYT0 321 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 HMGCRP04035 888 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 ZNF252P-AS1Q0IIN9 211 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 TUBB2AQ13885 445 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 C12orf56Q8IXR9 622 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 GLT1D1Q96MS3 346 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 TUBB2BQ9BVA1 445 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 CAPS2Q9BXY5 557 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 CARD9Q9H257 536 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 COQ4Q9Y3A0 265 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 FER1L6Q2WGJ9 1857 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 LRCH4O75427 683 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 LGR5O75473 907 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 GZMAP12544 262 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 NR1D1P20393 614 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 MMP8P22894 467 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 YWHAEP62258 255 aaKnown RBP10.78□□□□□ -0.68
RFFL-212ENST00000584655 BYSLQ13895 437 aaKnown RBP10.78□□□□□ -0.68
RFFL-212ENST00000584655 HADHQ16836 314 aaKnown RBP10.78□□□□□ -0.68
RFFL-212ENST00000584655 PIGZQ86VD9 579 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 UNC45BQ8IWX7 931 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 C3orf58Q8NDZ4 430 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 AENQ8WTP8 325 aaKnown RBP10.78□□□□□ -0.68
RFFL-212ENST00000584655 SENP8Q96LD8 212 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 WNT8AQ9H1J5 351 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 RAB6BQ9NRW1 208 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 TMEM51Q9NW97 253 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 LCMT1Q9UIC8 334 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 NRCAMQ92823 1304 aa10.78□□□□□ -0.68
RFFL-212ENST00000584655 PHF2O75151 1096 aa10.77□□□□□ -0.68
RFFL-212ENST00000584655 GRIK1P39086 918 aa10.77□□□□□ -0.68
RFFL-212ENST00000584655 CPLX4Q7Z7G2 160 aa10.77□□□□□ -0.68
RFFL-212ENST00000584655 ATAD1Q8NBU5 361 aa10.77□□□□□ -0.68
RFFL-212ENST00000584655 USP6NLQ92738 828 aa10.77□□□□□ -0.68
RFFL-212ENST00000584655 HVCN1Q96D96 273 aa10.77□□□□□ -0.68
RFFL-212ENST00000584655 RBM15Q96T37 977 aaKnown RBP eCLIP10.77□□□□□ -0.68
RFFL-212ENST00000584655 SEPT5Q99719 369 aaPredicted RBP10.77□□□□□ -0.68
RFFL-212ENST00000584655 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.68
RFFL-212ENST00000584655 SLC17A6Q9P2U8 582 aa10.77□□□□□ -0.68
RFFL-212ENST00000584655 UVRAGQ9P2Y5 699 aa10.77□□□□□ -0.68
RFFL-212ENST00000584655 NAALADL1Q9UQQ1 740 aa10.77□□□□□ -0.68
RFFL-212ENST00000584655 TTC24A2A3L6 582 aaPredicted RBP10.77□□□□□ -0.69
RFFL-212ENST00000584655 A6NJR5 290 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 GRK4P32298 578 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 GPR15P49685 360 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 PEX5P50542 639 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 CACNA2D1P54289 1103 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 PURAQ00577 322 aaKnown RBP10.77□□□□□ -0.69
RFFL-212ENST00000584655 ITKQ08881 620 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 SYPL2Q5VXT5 272 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 C11orf63Q6NUN7 778 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 DEFB106AQ8N104 65 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 LGMNQ99538 433 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 NACA2Q9H009 215 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 STARD7Q9NQZ5 370 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 SFMBT1Q9UHJ3 866 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 PCDHA3Q9Y5H8 950 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms