RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 CAPN6Q9Y6Q1 641 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 FRYQ5TBA9 3013 aa12.67□□□□□ -0.38
GGA3-217ENST00000583667 KRBA1A5PL33 1030 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 HIDE1A8MVS5 230 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
GGA3-217ENST00000583667 CES2O00748 559 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 PTGESO14684 152 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 SLU7O95391 586 aaKnown RBP12.66□□□□□ -0.38
GGA3-217ENST00000583667 MOCS3O95396 460 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 EOMESO95936 686 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 AKAP5P24588 427 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 CD52P31358 61 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 RPL9P32969 192 aaKnown RBP12.66□□□□□ -0.38
GGA3-217ENST00000583667 RAD23BP54727 409 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 WHAMMP3Q1A5X7 153 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 PLPP4Q5VZY2 271 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
GGA3-217ENST00000583667 UNC93AQ86WB7 457 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 SYCE1Q8N0S2 351 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 GSTCDQ8NEC7 633 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 WHAMMQ8TF30 809 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 CASP10Q92851 521 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 ELMO3Q96BJ8 720 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 FTHL17Q9BXU8 183 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 SDCBP2Q9H190 292 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 CXCL16Q9H2A7 254 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 ACP6Q9NPH0 428 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 RGS18Q9NS28 235 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 TAS2R14Q9NYV8 317 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 DLGAP2Q9P1A6 1054 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 UVRAGQ9P2Y5 699 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 NXF1Q9UBU9 619 aaKnown RBP12.66□□□□□ -0.38
GGA3-217ENST00000583667 PARP2Q9UGN5 583 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 SAR1BQ9Y6B6 198 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 CITO14578 2027 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 FANCMQ8IYD8 2048 aa12.66□□□□□ -0.38
GGA3-217ENST00000583667 GRID2IPA4D2P6 1211 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 MED7O43513 233 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 DCNP07585 359 aaKnown RBP12.65□□□□□ -0.38
GGA3-217ENST00000583667 VDRP11473 427 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 TCP1P17987 556 aaKnown RBP12.65□□□□□ -0.38
GGA3-217ENST00000583667 TNNC1P63316 161 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 NOMO3P69849 1222 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 C1QBPQ07021 282 aaKnown RBP12.65□□□□□ -0.38
GGA3-217ENST00000583667 STILQ15468 1287 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 CNGA2Q16280 664 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 MEI1Q5TIA1 1274 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 AGMOQ6ZNB7 445 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 MAML2Q8IZL2 1156 aaPredicted RBP12.65□□□□□ -0.38
GGA3-217ENST00000583667 SLC35G2Q8TBE7 412 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 TMEM176AQ96HP8 235 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 ZNF560Q96MR9 790 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 TLR10Q9BXR5 811 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 THAP2Q9H0W7 228 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 AAASQ9NRG9 546 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 RNF14Q9UBS8 474 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 WNT16Q9UBV4 365 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 TUBGCP4Q9UGJ1 667 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 ANGPTL2Q9UKU9 493 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 SNX12Q9UMY4 172 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 POLIQ9UNA4 740 aa12.65□□□□□ -0.38
GGA3-217ENST00000583667 KPNA7A9QM74 516 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 NARSO43776 548 aaKnown RBP12.64□□□□□ -0.39
GGA3-217ENST00000583667 MGEA5O60502 916 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 PALMO75781 387 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 ATP1A1P05023 1023 aaKnown RBP12.64□□□□□ -0.39
GGA3-217ENST00000583667 THP07101 528 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 MMP8P22894 467 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 TAF6P49848 677 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 GUCY2FP51841 1108 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 PTP4A2Q12974 167 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 SV2CQ496J9 727 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 ATAT1Q5SQI0 421 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 SPOUT1Q5T280 376 aaKnown RBP12.64□□□□□ -0.39
GGA3-217ENST00000583667 SLC24A5Q71RS6 500 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 MCOLN2Q8IZK6 566 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 CRYBG2Q8N1P7 616 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 C12orf76Q8N812 135 aaPredicted RBP12.64□□□□□ -0.39
GGA3-217ENST00000583667 CEP112Q8N8E3 955 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 SLC4A11Q8NBS3 891 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 TMEM35BQ8NCS4 154 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 SPATA18Q8TC71 538 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 RSPH1Q8WYR4 309 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 C18orf25Q96B23 403 aaPredicted RBP12.64□□□□□ -0.39
GGA3-217ENST00000583667 CYFIP2Q96F07 1278 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
GGA3-217ENST00000583667 RPS6KC1Q96S38 1066 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 TCF25Q9BQ70 676 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 ZSWIM1Q9BR11 485 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 DNAI2Q9GZS0 605 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 KCNK12Q9HB15 430 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 SEPT11Q9NVA2 429 aaKnown RBP12.64□□□□□ -0.39
GGA3-217ENST00000583667 HCFC2Q9Y5Z7 792 aa12.64□□□□□ -0.39
GGA3-217ENST00000583667 PDCD11Q14690 1871 aaKnown RBP12.63□□□□□ -0.39
GGA3-217ENST00000583667 FLNBO75369 2602 aaKnown RBP12.63□□□□□ -0.39
GGA3-217ENST00000583667 C9IYK1 514 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 THAP12O43422 761 aa12.63□□□□□ -0.39
GGA3-217ENST00000583667 BUB1O43683 1085 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms