RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CEP78Q5JTW2 689 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 ZNF626Q68DY1 528 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 OVCH2Q7RTZ1 564 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 YTHDF3Q7Z739 585 aaKnown RBP5.03□□□□□ -1.6
COPS3-217ENST00000583160 NEK8Q86SG6 692 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 IZUMO1Q8IYV9 350 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 PNLDC1Q8NA58 520 aaKnown RBP5.03□□□□□ -1.6
COPS3-217ENST00000583160 BPIFB1Q8TDL5 484 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 LENG8Q96PV6 779 aaPredicted RBP5.03□□□□□ -1.6
COPS3-217ENST00000583160 SH2D3AQ9BRG2 576 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 QTRT1Q9BXR0 403 aaKnown RBP5.03□□□□□ -1.6
COPS3-217ENST00000583160 B3GNT5Q9BYG0 378 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 SMURF2Q9HAU4 748 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 THRAP3Q9Y2W1 955 aaKnown RBP5.03□□□□□ -1.6
COPS3-217ENST00000583160 SNX14Q9Y5W7 946 aa5.03□□□□□ -1.6
COPS3-217ENST00000583160 TMEM233B4DJY2 109 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 PPP6CO00743 305 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 PRKCBP05771 671 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 RAB32Q13637 225 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 EPHA10Q5JZY3 1008 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 L1TD1Q5T7N2 865 aaKnown RBP5.02□□□□□ -1.61
COPS3-217ENST00000583160 SLC9A4Q6AI14 798 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 TRIM72Q6ZMU5 477 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 MAEAQ7L5Y9 396 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 CAND1Q86VP6 1230 aaKnown RBP5.02□□□□□ -1.61
COPS3-217ENST00000583160 CHSY1Q86X52 802 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 IL31RAQ8NI17 732 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 TMEM171Q8WVE6 324 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 DAZAP1Q96EP5 407 aaKnown RBP5.02□□□□□ -1.61
COPS3-217ENST00000583160 THAP7Q9BT49 309 aaPredicted RBP5.02□□□□□ -1.61
COPS3-217ENST00000583160 NRIP3Q9NQ35 241 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 NOB1Q9ULX3 412 aaKnown RBP5.02□□□□□ -1.61
COPS3-217ENST00000583160 GABRQQ9UN88 632 aa5.02□□□□□ -1.61
COPS3-217ENST00000583160 USP19O94966 1318 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 MYO1FO00160 1098 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 AP4M1O00189 453 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 MARCH6O60337 910 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 EXOC3O60645 756 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 VNN1O95497 513 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 TUBB4AP04350 444 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 EN2P19622 333 aaPredicted RBP5.01□□□□□ -1.61
COPS3-217ENST00000583160 SLC7A1P30825 629 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 CYP1B1Q16678 543 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 ODR4Q5SWX8 454 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 CXorf57Q6NSI4 855 aaKnown RBP5.01□□□□□ -1.61
COPS3-217ENST00000583160 SLC18B1Q6NT16 456 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 MTHFD1LQ6UB35 978 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 CATSPERGQ6ZRH7 1159 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 RAVER1Q8IY67 606 aaKnown RBP5.01□□□□□ -1.61
COPS3-217ENST00000583160 TERB1Q8NA31 727 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 MAML1Q92585 1016 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 RUNDC1Q96C34 613 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 ASB2Q96Q27 587 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 TMEM60Q9H2L4 133 aa5.01□□□□□ -1.61
COPS3-217ENST00000583160 GBA2Q9HCG7 927 aaPredicted RBP5.01□□□□□ -1.61
COPS3-217ENST00000583160 CAPN8A6NHC0 703 aa5□□□□□ -1.61
COPS3-217ENST00000583160 H7C1Q1 480 aa5□□□□□ -1.61
COPS3-217ENST00000583160 TBX3O15119 743 aa5□□□□□ -1.61
COPS3-217ENST00000583160 U2AF1L5P0DN76 240 aaPredicted RBP5□□□□□ -1.61
COPS3-217ENST00000583160 U2AF1Q01081 240 aaKnown RBP eCLIP5□□□□□ -1.61
COPS3-217ENST00000583160 E2F1Q01094 437 aa5□□□□□ -1.61
COPS3-217ENST00000583160 PTCHD3Q3KNS1 767 aa5□□□□□ -1.61
COPS3-217ENST00000583160 SUPT20HL1Q3ZLR7 823 aa5□□□□□ -1.61
COPS3-217ENST00000583160 DCAF12L1Q5VU92 463 aa5□□□□□ -1.61
COPS3-217ENST00000583160 FCRL6Q6DN72 434 aa5□□□□□ -1.61
COPS3-217ENST00000583160 SWSAP1Q6NVH7 229 aa5□□□□□ -1.61
COPS3-217ENST00000583160 KIRREL2Q6UWL6 708 aa5□□□□□ -1.61
COPS3-217ENST00000583160 DPY19L3Q6ZPD9 716 aa5□□□□□ -1.61
COPS3-217ENST00000583160 CHPFQ8IZ52 775 aa5□□□□□ -1.61
COPS3-217ENST00000583160 KIAA0319LQ8IZA0 1049 aa5□□□□□ -1.61
COPS3-217ENST00000583160 RPL36ALQ969Q0 106 aaKnown RBP5□□□□□ -1.61
COPS3-217ENST00000583160 SUCLG2Q96I99 432 aa5□□□□□ -1.61
COPS3-217ENST00000583160 C17orf80Q9BSJ5 609 aa5□□□□□ -1.61
COPS3-217ENST00000583160 ZNF518BQ9C0D4 1074 aa5□□□□□ -1.61
COPS3-217ENST00000583160 BHMT2Q9H2M3 363 aa5□□□□□ -1.61
COPS3-217ENST00000583160 BTBD3Q9Y2F9 522 aa5□□□□□ -1.61
COPS3-217ENST00000583160 TBC1D30Q9Y2I9 924 aa5□□□□□ -1.61
COPS3-217ENST00000583160 POC1B-GALNT4F8VUJ3 575 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 ADAMTS3O15072 1205 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 TP73O15350 636 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 PRPF3O43395 683 aaKnown RBP4.99□□□□□ -1.61
COPS3-217ENST00000583160 FPR3P25089 353 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 SUMO3P55854 103 aaPredicted RBP4.99□□□□□ -1.61
COPS3-217ENST00000583160 LRRC41Q15345 812 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 CNN3Q15417 329 aaKnown RBP4.99□□□□□ -1.61
COPS3-217ENST00000583160 C11orf87Q6NUJ2 197 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 ZDHHC24Q6UX98 284 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 SPARTQ8N0X7 666 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 GALNT4Q8N4A0 578 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 C8orf58Q8NAV2 365 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 RSPRY1Q96DX4 576 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 RITA1Q96K30 269 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 C5orf34Q96MH7 638 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 SNX18Q96RF0 628 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 PRR25Q96S07 402 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 C22orf23Q9BZE7 217 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 CIPCQ9C0C6 399 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 A1CFQ9NQ94 594 aaKnown RBP4.99□□□□□ -1.61
COPS3-217ENST00000583160 XPNPEP3Q9NQH7 507 aa4.99□□□□□ -1.61
COPS3-217ENST00000583160 CPNE7Q9UBL6 633 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms