RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TLE6Q9H808 572 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 DMAP1Q9NPF5 467 aaPredicted RBP10.08□□□□□ -0.8
RFFL-210ENST00000582308 SPTLC3Q9NUV7 552 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 HSFX1Q9UBD0 423 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 NAGPAQ9UK23 515 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 MAFFQ9ULX9 164 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 EPN1Q9Y6I3 576 aaPredicted RBP10.08□□□□□ -0.8
RFFL-210ENST00000582308 C2orf16Q68DN1 1984 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 SZT2Q5T011 3432 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 OBSL1O75147 1896 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 TMCO5BA8MYB1 307 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 XPO1O14980 1071 aaKnown RBP10.07□□□□□ -0.8
RFFL-210ENST00000582308 NDUFA10O95299 355 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 LCA5LO95447 670 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 GLUD1P00367 558 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 C1RP00736 705 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 FTLP02792 175 aaPredicted RBP10.07□□□□□ -0.8
RFFL-210ENST00000582308 SETSIPP0DME0 302 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 GZMAP12544 262 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 EPCAMP16422 314 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 ELF1P32519 619 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 GTF2F1P35269 517 aaKnown RBP eCLIP10.07□□□□□ -0.8
RFFL-210ENST00000582308 PLA2G4AP47712 749 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 NRIP1P48552 1158 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 RPL34P49207 117 aaKnown RBP10.07□□□□□ -0.8
RFFL-210ENST00000582308 RGS7P49802 495 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 PTP4A2Q12974 167 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 PDCLQ13371 301 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 ADGRE1Q14246 886 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 DDR2Q16832 855 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 MGAT5BQ3V5L5 792 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 PTPN20Q4JDL3 420 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 CCDC122Q5T0U0 273 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 SDHAF4Q5VUM1 108 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 ACAD10Q6JQN1 1059 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 ALKBH5Q6P6C2 394 aaKnown RBP10.07□□□□□ -0.8
RFFL-210ENST00000582308 GPRIN1Q7Z2K8 1008 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 PIGZQ86VD9 579 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 SCN4BQ8IWT1 228 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 TCEAL8Q8IYN2 117 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 KREMEN2Q8NCW0 462 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 STK32AQ8WU08 396 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 CPXM1Q96SM3 734 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 SEPT5Q99719 369 aaPredicted RBP10.07□□□□□ -0.8
RFFL-210ENST00000582308 SLC4A5Q9BY07 1137 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 UBXN6Q9BZV1 441 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 CYP4F11Q9HBI6 524 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 LMCD1Q9NZU5 365 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 TJP2Q9UDY2 1190 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 FBXW11Q9UKB1 542 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 REXO2Q9Y3B8 237 aaKnown RBP10.07□□□□□ -0.8
RFFL-210ENST00000582308 CEP83Q9Y592 693 aa10.07□□□□□ -0.8
RFFL-210ENST00000582308 EIF3CLB5ME19 914 aaKnown RBP10.06□□□□□ -0.8
RFFL-210ENST00000582308 PIK3R2O00459 728 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 PRRG1O14668 218 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 TNFRSF10BO14763 440 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 TRIM66O15016 1216 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 ARHGAP6O43182 974 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 RTN2O75298 545 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 ATF6P18850 670 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 POU3F3P20264 500 aaPredicted RBP10.06□□□□□ -0.8
RFFL-210ENST00000582308 MMP8P22894 467 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 CYLC1P35663 651 aaPredicted RBP10.06□□□□□ -0.8
RFFL-210ENST00000582308 TUFMP49411 452 aaKnown RBP10.06□□□□□ -0.8
RFFL-210ENST00000582308 SLC8A3P57103 927 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 RBM10P98175 930 aaKnown RBP10.06□□□□□ -0.8
RFFL-210ENST00000582308 CENPCQ03188 943 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 HYAL1Q12794 435 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 KCNC3Q14003 757 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 C2CD6Q53TS8 623 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 TCEAL5Q5H9L2 206 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 HABP4Q5JVS0 413 aaKnown RBP10.06□□□□□ -0.8
RFFL-210ENST00000582308 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 TOGARAM2Q6ZUX3 1019 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 TMEM110Q86TL2 294 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 ERICH1Q86X53 443 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 PHF13Q86YI8 300 aaPredicted RBP10.06□□□□□ -0.8
RFFL-210ENST00000582308 STKLD1Q8NE28 680 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 VN1R2Q8NFZ6 395 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 SLC7A14Q8TBB6 771 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 GPR152Q8TDT2 470 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 KCTD13Q8WZ19 329 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 PPP1R13BQ96KQ4 1090 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 SPATA17Q96L03 361 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 HSFY1Q96LI6 401 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 C8orf48Q96LL4 319 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 FAM161BQ96MY7 647 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 EIF3CQ99613 913 aaKnown RBP10.06□□□□□ -0.8
RFFL-210ENST00000582308 ISCUQ9H1K1 167 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 NSUN3Q9H649 340 aaKnown RBP10.06□□□□□ -0.8
RFFL-210ENST00000582308 MAN1C1Q9NR34 630 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 YIPF1Q9Y548 306 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 INSL5Q9Y5Q6 135 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 HCFC2Q9Y5Z7 792 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 MTCH2Q9Y6C9 303 aa10.06□□□□□ -0.8
RFFL-210ENST00000582308 E5RJQ4 531 aa10.05□□□□□ -0.8
RFFL-210ENST00000582308 ERBB2P04626 1255 aa10.05□□□□□ -0.8
RFFL-210ENST00000582308 C8AP07357 584 aa10.05□□□□□ -0.8
RFFL-210ENST00000582308 LCP1P13796 627 aa10.05□□□□□ -0.8
RFFL-210ENST00000582308 NSFP46459 744 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms