RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 GBP1P32455 592 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 RDXP35241 583 aaKnown RBP9.77□□□□□ -0.85
SS18-220ENST00000582092 MLH1P40692 756 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 LHX1P48742 406 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 PEX5P50542 639 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 BCAT1P54687 386 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 LILRA4P59901 499 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 LMNB2Q03252 620 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 MGAT3Q09327 533 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 BST2Q10589 180 aaKnown RBP9.77□□□□□ -0.85
SS18-220ENST00000582092 PTP4A2Q12974 167 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 PDCLQ13371 301 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 LPIN1Q14693 890 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 ACAP1Q15027 740 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 PPP1R7Q15435 360 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 SOWAHAQ2M3V2 549 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 FAM102AQ5T9C2 384 aaPredicted RBP9.77□□□□□ -0.85
SS18-220ENST00000582092 MRPL10Q7Z7H8 261 aaKnown RBP9.77□□□□□ -0.85
SS18-220ENST00000582092 SLC13A5Q86YT5 568 aaPredicted RBP9.77□□□□□ -0.85
SS18-220ENST00000582092 TMEM86AQ8N2M4 240 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 WDTC1Q8N5D0 677 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 EXD1Q8NHP7 514 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 GRK7Q8WTQ7 553 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 ALG3Q92685 438 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 LPPQ93052 612 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 TOP1MTQ969P6 601 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 TWNKQ96RR1 684 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 TGS1Q96RS0 853 aaKnown RBP9.77□□□□□ -0.85
SS18-220ENST00000582092 HINFPQ9BQA5 517 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 MAK16Q9BXY0 300 aaKnown RBP9.77□□□□□ -0.85
SS18-220ENST00000582092 DDX47Q9H0S4 455 aaKnown RBP9.77□□□□□ -0.85
SS18-220ENST00000582092 METTL5Q9NRN9 209 aaKnown RBP9.77□□□□□ -0.85
SS18-220ENST00000582092 HMGXB4Q9UGU5 601 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 TMEM59LQ9UK28 342 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 LRFN2Q9ULH4 789 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 INPP5FQ9Y2H2 1132 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 RWDD3Q9Y3V2 267 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 A0A0U1RQF3 1178 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 SPDYE4A6NLX3 237 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 PPEF2O14830 753 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 HSF2BPO75031 334 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 TJP3O95049 919 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 EOMESO95936 686 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 GAS8O95995 478 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 ODC1P11926 461 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 WARSP23381 471 aaKnown RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 TNFRSF8P28908 595 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 PCSK1P29120 753 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 GPD2P43304 727 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 RGS7P49802 495 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 SCNN1GP51170 649 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 COPS2P61201 443 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 RPL7AP62424 266 aaKnown RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 MRPS25P82663 173 aaKnown RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 RNASELQ05823 741 aaKnown RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 BEND6Q5SZJ8 279 aaPredicted RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 PPP1R26Q5T8A7 1209 aaPredicted RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 LRRC38Q5VT99 294 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 ARHGAP17Q68EM7 881 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 LLGL2Q6P1M3 1020 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 EMBQ6PCB8 327 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 CCDC137Q6PK04 289 aaKnown RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 GLB1LQ6UWU2 654 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.76□□□□□ -0.85
SS18-220ENST00000582092 SND1Q7KZF4 910 aaKnown RBP eCLIP9.76□□□□□ -0.85
SS18-220ENST00000582092 XYLT1Q86Y38 959 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 ZDHHC17Q8IUH5 632 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 KATNAL2Q8IYT4 538 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 ABI1Q8IZP0 508 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 CRYBG2Q8N1P7 616 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 THEM5Q8N1Q8 247 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 TMEM130Q8N3G9 435 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 ANKRD52Q8NB46 1076 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 KCTD6Q8NC69 237 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 ARNTL2Q8WYA1 636 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 CD101Q93033 1021 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 SENP8Q96LD8 212 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 ZFP42Q96MM3 310 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 UROC1Q96N76 676 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 PPP1R10Q96QC0 940 aaKnown RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 CPXM1Q96SM3 734 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 PLEKHA4Q9H4M7 779 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 AGO3Q9H9G7 860 aaKnown RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 GOLGA2P5Q9HBQ8 144 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.76□□□□□ -0.85
SS18-220ENST00000582092 KANSL3Q9P2N6 904 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 AMACRQ9UHK6 382 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 DMGDHQ9UI17 866 aaKnown RBP9.76□□□□□ -0.85
SS18-220ENST00000582092 DSEQ9UL01 958 aa9.76□□□□□ -0.85
SS18-220ENST00000582092 CASTOR2A6NHX0 329 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 ENPP3O14638 875 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 PRPSAP2O60256 369 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 GJB6O95452 261 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 POMCP01189 267 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 ERBB2P04626 1255 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 PDGFRAP16234 1089 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 PTPN1P18031 435 aaKnown RBP9.75□□□□□ -0.85
SS18-220ENST00000582092 GPD1P21695 349 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 SDC4P31431 198 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 GABRB2P47870 512 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms