RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 LRRN2O75325 713 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 NDUFA10O95299 355 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 PDGFRBP09619 1106 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 OR4Q2P0C623 313 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 NPR3P17342 541 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 CD58P19256 250 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 ACAT1P24752 427 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 PON1P27169 355 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 NDST1P52848 882 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 MFAP3P55082 362 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 PLD1Q13393 1074 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 RRAGAQ7L523 313 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 KIAA1328Q86T90 577 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 TCEAL8Q8IYN2 117 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 B3GALNT2Q8NCR0 500 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 ELMO3Q96BJ8 720 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 FUBP3Q96I24 572 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 NT5C1AQ9BXI3 368 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 ABCB6Q9NP58 842 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 ZDHHC7Q9NXF8 308 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 NR2E1Q9Y466 385 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 PCDHB5Q9Y5E4 795 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 ADGRG1Q9Y653 693 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 EPN1Q9Y6I3 576 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 MTMR11A4FU01 709 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 EIF3CLB5ME19 914 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 KRT86O43790 486 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 CILPO75339 1184 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 C8AP07357 584 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 HNRNPA1P09651 372 aaKnown RBP eCLIP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 PTPN1P18031 435 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 SLC9A1P19634 815 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 LMO2P25791 158 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 HOXA9P31269 272 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 PSMC1P62191 440 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 ETF1P62495 437 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 ADCY1Q08828 1119 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 ASIC2Q16515 512 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 TDRD12Q587J7 1177 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 PPM1LQ5SGD2 360 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 RARS2Q5T160 578 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 FAM171BQ6P995 826 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 RNF19BQ6ZMZ0 732 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 SPATA2LQ8IUW3 424 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 CMASQ8NFW8 434 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 SLC7A14Q8TBB6 771 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 MYCBPAPQ8TBZ2 947 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 NKD2Q969F2 451 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 TMEM209Q96SK2 561 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 EIF3CQ99613 913 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 ARID3AQ99856 593 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 HAUS4Q9H6D7 363 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 CYP4F11Q9HBI6 524 aa14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 UBE2TQ9NPD8 197 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-220ENST00000581737 PTPRDP23468 1912 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 PTPRZ1P23471 2315 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 AKR1B10O60218 316 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 XYLBO75191 536 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 ZMYND10O75800 440 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 SERPING1P05155 500 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 POU2F2P09086 479 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 SPATA31D3P0C874 917 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 ID4P47928 161 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 TUFMP49411 452 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 POLR2FP61218 127 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 ITIH3Q06033 890 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 CFAP221Q4G0U5 840 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 MDH1BQ5I0G3 518 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 PHLDB3Q6NSJ2 640 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 SPATA31D4Q6ZUB0 917 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 TOGARAM2Q6ZUX3 1019 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 ARHGEF19Q8IW93 802 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 CRYBG2Q8N1P7 616 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 ZNF592Q92610 1267 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 PGLYRP2Q96PD5 576 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 PKMYT1Q99640 499 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 ELOVL4Q9GZR5 314 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 CRTAC1Q9NQ79 661 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 ABI2Q9NYB9 513 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 GTF3C4Q9UKN8 822 aa14.29□□□□□ -0.12
CSNK1D-220ENST00000581737 MYBPHLA2RUH7 354 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 LRRC53A6NM62 1247 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 USP27XA6NNY8 438 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 HCRTO43612 131 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 LRG1P02750 347 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 FERP16591 822 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 MAGEA11P43364 429 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 ALDH1A3P47895 512 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 RPL10AP62906 217 aaKnown RBP14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 CYP27A1Q02318 531 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 DUSP4Q13115 394 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 TUBB2AQ13885 445 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 RAPGEF1Q13905 1077 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 CES5AQ6NT32 575 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 VSTM1Q6UX27 236 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 RAD9BQ6WBX8 426 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 ZNF662Q6ZS27 426 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 ERMP1Q7Z2K6 904 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 ACOT1Q86TX2 421 aa14.28□□□□□ -0.12
CSNK1D-220ENST00000581737 LRRTM3Q86VH5 581 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms