RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MTMR1Q13613 665 aa4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 FAM187BQ17R55 369 aa4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 DEF8Q6ZN54 512 aa4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 BCDIN3DQ7Z5W3 292 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 KRT78Q8N1N4 520 aa4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 PRPF38AQ8NAV1 312 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 XAGE5Q8WWM1 108 aa4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 MTMR8Q96EF0 704 aa4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 LYZL4Q96KX0 146 aa4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 CAMK1GQ96NX5 476 aa4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 CIPCQ9C0C6 399 aa4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 CCDC8Q9H0W5 538 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-206ENST00000581631 FAM90A8PA6NJQ4 464 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 DSCR3O14972 297 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 SMAD6O43541 496 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 FAM90A13PP0C7W8 464 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 FAM90A24PP0C7X0 464 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 HDCP19113 662 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 ALDH5A1P51649 535 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 MAP2K6P52564 334 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 PSG6Q00889 435 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 ITKQ08881 620 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 E2F2Q14209 437 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 ZNF268Q14587 947 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 L1TD1Q5T7N2 865 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 THEMIS2Q5TEJ8 643 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 EFCAB2Q5VUJ9 269 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 LAYNQ6UX15 382 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 PPP1R10Q96QC0 940 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 SLC13A1Q9BZW2 595 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 LMBRD1Q9NUN5 540 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 MRFAP1Q9Y605 127 aa4.4□□□□□ -1.71
SMCHD1-206ENST00000581631 GTPBP1O00178 669 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 UNC5CO95185 931 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 DLDP09622 509 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 PDE6CP51160 858 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 NKX6-1P78426 367 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 ZIK1Q3SY52 487 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 SLC15A3Q8IY34 581 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 FAM167AQ96KS9 214 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 SIGLEC11Q96RL6 698 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 PRR25Q96S07 402 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 MMS19Q96T76 1030 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 CXorf36Q9H7Y0 433 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 PNPOQ9NVS9 261 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 PLEKHM1Q9Y4G2 1056 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 PCDHA1Q9Y5I3 950 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 COL4A3BPQ9Y5P4 624 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 ZMYM2Q9UBW7 1377 aa4.39□□□□□ -1.71
SMCHD1-206ENST00000581631 BTBD19C9JJ37 291 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 hCG_1984214I3L0E3 225 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 TLR2O60603 784 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 PRKCBP05771 671 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 MYCLP12524 364 aaPredicted RBP4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 PDCP20941 246 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 SCP2P22307 547 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 E2F1Q01094 437 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 GHRHRQ02643 423 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 CFHR1Q03591 330 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 MYO1EQ12965 1108 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 SERPINA13PQ6UXR4 307 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 DPY19L3Q6ZPD9 716 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 ABRAQ8N0Z2 381 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 ACRBPQ8NEB7 543 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 ADAMTS18Q8TE60 1221 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 MAP4K1Q92918 833 aa4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 FOXP1Q9H334 677 aaPredicted RBP4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 MRPS17Q9Y2R5 130 aaKnown RBP4.38□□□□□ -1.71
SMCHD1-206ENST00000581631 CYSRT1A8MQ03 144 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 TMEM232C9JQI7 657 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 FTLP02792 175 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 ADORA2AP29274 412 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 SOX8P57073 446 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 SEC23BQ15437 767 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 DEPDC1Q5TB30 811 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 ZNF280BQ86YH2 543 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 SFTPA1Q8IWL2 248 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 CUL5Q93034 780 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 RSPRY1Q96DX4 576 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 FYTTD1Q96QD9 318 aaKnown RBP4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 SMAD5Q99717 465 aaKnown RBP4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 MESP1Q9BRJ9 268 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 PCDH12Q9NPG4 1184 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 XPR1Q9UBH6 696 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 HEY2Q9UBP5 337 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 SHOC2Q9UQ13 582 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 TNKSO95271 1327 aa4.37□□□□□ -1.71
SMCHD1-206ENST00000581631 VNN1O95497 513 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 FGAP02671 866 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 GRPP07492 148 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 LRPAP1P30533 357 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 SEMA3AQ14563 771 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 PLS1Q14651 629 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 LY6KQ17RY6 165 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 UBAP2Q5T6F2 1119 aaKnown RBP4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 USP45Q70EL2 814 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 PELI3Q8N2H9 469 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 CELF5Q8N6W0 485 aaKnown RBP4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 LINC01465Q8N7H1 131 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 ZNF548Q8NEK5 533 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms