RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 IFRD2Q12894 506 aaPredicted RBP6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ELF2Q15723 593 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CTXN3Q4LDR2 81 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 C9orf50Q5SZB4 431 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TEX35Q5T0J7 233 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAM182AQ5T1J6 154 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SPOUT1Q5T280 376 aaKnown RBP6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 COL13A1Q5TAT6 717 aaPredicted RBP6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 OTUD1Q5VV17 481 aaPredicted RBP6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAM171BQ6P995 826 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 DCUN1D2Q6PH85 259 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 BHLHA9Q7RTU4 235 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 METTL23Q86XA0 190 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ZDHHC14Q8IZN3 488 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TTC39CQ8N584 583 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 COLGALT1Q8NBJ5 622 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 GPR152Q8TDT2 470 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 IPO4Q8TEX9 1081 aaKnown RBP6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RXFP2Q8WXD0 754 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TRIM11Q96F44 468 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 HES6Q96HZ4 224 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TNIP3Q96KP6 325 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PEBP4Q96S96 227 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 HINFPQ9BQA5 517 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SELENOOQ9BVL4 669 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 COLEC11Q9BWP8 271 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 DUSP16Q9BY84 665 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MAGEB5Q9BZ81 275 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ULBP1Q9BZM6 244 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ZCWPW1Q9H0M4 648 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PARVAQ9NVD7 372 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ABI2Q9NYB9 513 aaPredicted RBP6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CALCOCO1Q9P1Z2 691 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 KANSL3Q9P2N6 904 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TMEM59LQ9UK28 342 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 KIAA1257Q9ULG3 409 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 EVPLQ92817 2033 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FRMPD3Q5JV73 1810 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MYH11P35749 1972 aa6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TRIP12Q14669 1992 aaPredicted RBP6.48□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CEP350Q5VT06 3117 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PCNTO95613 3336 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 C2CD4BA6NLJ0 364 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SIGLEC16A6NMB1 481 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MYO1FO00160 1098 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TBC1D4O60343 1298 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 OAZ2O95190 189 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 EFEMP2O95967 443 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FGBP02675 491 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 KRT1P04264 644 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TUBB4AP04350 444 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ALDH2P05091 517 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAM163BP0C2L3 166 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 USP17L7P0C7H9 530 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SETSIPP0DME0 302 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PYGMP11217 842 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 KRT3P12035 628 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 DNAJB2P25686 324 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CTNNA2P26232 953 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PLA2G4AP47712 749 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RPL34P49207 117 aaKnown RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TKTL1P51854 596 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 GSCP56915 257 aaPredicted RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ATP11AP98196 1134 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TSPY1Q01534 308 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PLCB3Q01970 1234 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 PPIGQ13427 754 aaKnown RBP eCLIP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MTMR3Q13615 1198 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MRPL58Q14197 206 aaKnown RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 BTG3Q14201 252 aaPredicted RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ZNF268Q14587 947 aaPredicted RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 STILQ15468 1287 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 IFI16Q16666 785 aaKnown RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 DDR2Q16832 855 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CDO1Q16878 200 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 WHAMMP3Q1A5X7 153 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ERCC6LQ2NKX8 1250 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SMTNL2Q2TAL5 461 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CCDC14Q49A88 953 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CC2D1AQ6P1N0 951 aaPredicted RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 KCNT2Q6UVM3 1135 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RNF19BQ6ZMZ0 732 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CYP4V2Q6ZWL3 525 aaPredicted RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TMEM110Q86TL2 294 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SCN4BQ8IWT1 228 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SLC39A11Q8N1S5 342 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MNS1Q8NEH6 495 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 SCAMP5Q8TAC9 235 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 RIN2Q8WYP3 895 aaPredicted RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 IGSF21Q96ID5 467 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 VCPIP1Q96JH7 1222 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 CFAP57Q96MR6 1250 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ZNF558Q96NG5 402 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 YME1L1Q96TA2 773 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAM118BQ9BPY3 351 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 ACBD6Q9BR61 282 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 TMEM175Q9BSA9 504 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 AP1M1Q9BXS5 423 aa6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 MRPL9Q9BYD2 267 aaKnown RBP6.47□□□□□ -1.37
RNU4ATAC-201ENST00000580972 FAM124BQ9H5Z6 455 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms