RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 POU5F1Q01860 360 aaKnown RBP20.5■□□□□ 0.87
NDEL1-209ENST00000580738 MAP7D1Q3KQU3 841 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 FILIP1Q7Z7B0 1213 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 ADGRG2Q8IZP9 1017 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 WHAMMQ8TF30 809 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 POMGNT1Q8WZA1 660 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 SPACA7Q96KW9 195 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 ZSCAN31Q96LW9 406 aaPredicted RBP20.5■□□□□ 0.87
NDEL1-209ENST00000580738 PILRBQ9UKJ0 227 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 PTPRDP23468 1912 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 ATP2C2O75185 946 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 TBCAO75347 108 aaKnown RBP20.49■□□□□ 0.87
NDEL1-209ENST00000580738 CFIP05156 583 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 USP46P62068 366 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 LYSMD4Q5XG99 296 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 ARL6IP4Q66PJ3 421 aaKnown RBP20.49■□□□□ 0.87
NDEL1-209ENST00000580738 C12orf40Q86WS4 652 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 NT5DC4Q86YG4 428 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 TMEM86AQ8N2M4 240 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 CHCHD4Q8N4Q1 142 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 CXorf38Q8TB03 319 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 HMGB4Q8WW32 186 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 CALML4Q96GE6 196 aa20.49■□□□□ 0.87
NDEL1-209ENST00000580738 BCCIPQ9P287 314 aaKnown RBP eCLIP20.49■□□□□ 0.87
NDEL1-209ENST00000580738 MYMKA6NI61 221 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 UPK3BL1B0FP48 263 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 UPK3BL2E5RIL1 263 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 ADAM23O75077 832 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 KAT7O95251 611 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 CAPNS1P04632 268 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 PLCG1P19174 1290 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 ABCD1P33897 745 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 UBA7P41226 1012 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 DHCR24Q15392 516 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 DEFB119Q8N690 84 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 CSGALNACT2Q8N6G5 542 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 RAD54LQ92698 747 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 FUBP3Q96I24 572 aaKnown RBP eCLIP20.48■□□□□ 0.87
NDEL1-209ENST00000580738 PNKPQ96T60 521 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 FAM213AQ9BRX8 229 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 GTPBP2Q9BX10 602 aaKnown RBP20.48■□□□□ 0.87
NDEL1-209ENST00000580738 RNF38Q9H0F5 515 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 ST6GALNAC4Q9H4F1 302 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 POLMQ9NP87 494 aaPredicted RBP20.48■□□□□ 0.87
NDEL1-209ENST00000580738 SNX9Q9Y5X1 595 aa20.48■□□□□ 0.87
NDEL1-209ENST00000580738 ANAPC1Q9H1A4 1944 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 GABRDO14764 452 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 MAGEA11P43364 429 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 KIR2DL1P43626 348 aaPredicted RBP20.47■□□□□ 0.87
NDEL1-209ENST00000580738 KCNA1Q09470 495 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 SOWAHAQ2M3V2 549 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 PEAR1Q5VY43 1037 aaPredicted RBP20.47■□□□□ 0.87
NDEL1-209ENST00000580738 FAM171BQ6P995 826 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 RHBDF2Q6PJF5 856 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 ZNF720Q7Z2F6 126 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 ADGRF2Q8IZF7 708 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 PGBD3Q8N328 593 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 LRRC52Q8N7C0 313 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 OR2I1PQ8NGU4 316 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 SPATA18Q8TC71 538 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 SAAL1Q96ER3 474 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 AK8Q96MA6 479 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 SMPD4Q9NXE4 827 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 GDAP2Q9NXN4 497 aa20.47■□□□□ 0.87
NDEL1-209ENST00000580738 TNRC6BQ9UPQ9 1833 aaKnown RBP20.46■□□□□ 0.87
NDEL1-209ENST00000580738 TCRBV21S2A2A0A5A6 115 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 FAM221BA6H8Z2 402 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 SLC26A4O43511 780 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 PCSK1P29120 753 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 LHX1P48742 406 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 PDE6CP51160 858 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 ATXN3P54252 364 aaPredicted RBP20.46■□□□□ 0.87
NDEL1-209ENST00000580738 SPDYCQ5MJ68 293 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 EOGTQ5NDL2 527 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 LMBRD2Q68DH5 695 aaPredicted RBP20.46■□□□□ 0.87
NDEL1-209ENST00000580738 PROSER1Q86XN7 944 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 TOP6BLQ8N6T0 577 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 SPATA17Q96L03 361 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 TRPM5Q9NZQ8 1165 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 SIX4Q9UIU6 781 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 SLC6A14Q9UN76 642 aa20.46■□□□□ 0.87
NDEL1-209ENST00000580738 LOC400499M0QZD8 3231 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 A0A0A0MRY4 1105 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 APODP05090 189 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 KRT19P08727 400 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 BDNFP23560 247 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 LMO2P25791 158 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 PSMC1P62191 440 aaKnown RBP20.45■□□□□ 0.86
NDEL1-209ENST00000580738 SLC7A9P82251 487 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 GRIN1Q05586 938 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 KDSRQ06136 332 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 GFPT1Q06210 699 aaPredicted RBP20.45■□□□□ 0.86
NDEL1-209ENST00000580738 RESTQ13127 1097 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 POSTNQ15063 836 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 HSF5Q4G112 596 aaPredicted RBP20.45■□□□□ 0.86
NDEL1-209ENST00000580738 C19orf48Q6RUI8 117 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 SFR1Q86XK3 245 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 BRSK2Q8IWQ3 736 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 HDDC3Q8N4P3 179 aa20.45■□□□□ 0.86
NDEL1-209ENST00000580738 CACTINQ8WUQ7 758 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms