RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	CWC27	Q6UX04	472 aa	Known RBP	6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	NFXL1	Q6ZNB6	911 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	ATG14	Q6ZNE5	492 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	ITIH5	Q86UX2	942 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	FERMT3	Q86UX7	667 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	TMC8	Q8IU68	726 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	SPACA3	Q8IXA5	215 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	TMTC2	Q8N394	836 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	CCDC33	Q8N5R6	958 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	FRMD1	Q8N878	549 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	ZNF417	Q8TAU3	575 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	USP33	Q8TEY7	942 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	GLMN	Q92990	594 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	TMEM176A	Q96HP8	235 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	CEP170P1	Q96L14	293 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	ZNF587	Q96SQ5	575 aa	Predicted RBP	6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	LGMN	Q99538	433 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	RIT2	Q99578	217 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	LRRC3	Q9BY71	257 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	TM7SF3	Q9NS93	570 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	FBXL5	Q9UKA1	691 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	TBX20	Q9UMR3	447 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	YIPF1	Q9Y548	306 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	PPME1	Q9Y570	386 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	ASB3	Q9Y575	518 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	GPC6	Q9Y625	555 aa	Predicted RBP	6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	COL12A1	Q99715	3063 aa		6.56	□□□□□ -1.36
KPNB1-209	ENST00000580158	MYOF	Q9NZM1	2061 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158		A0A1B0GUA9	196 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	SCO2	A0A1W2PP80	73 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	hCG_1984214	I3L0E3	225 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158		I3L4J1	428 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	EML1	O00423	815 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	PTGES	O14684	152 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	TNFSF14	O43557	240 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	STBD1	O95210	358 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	PRAMEF12	O95522	483 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	MATK	P42679	507 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	USP11	P51784	963 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	PSMC5	P62195	406 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	POU5F1B	Q06416	359 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	PDE4C	Q08493	712 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	GRIK2	Q13002	908 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	TAF12	Q16514	161 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	UPP1	Q16831	310 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	HSF5	Q4G112	596 aa	Predicted RBP	6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	EOGT	Q5NDL2	527 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	PLA2G4F	Q68DD2	849 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	WWC2	Q6AWC2	1192 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	ZNF280D	Q6N043	979 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	CASC1	Q6TDU7	716 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	IL27RA	Q6UWB1	636 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	DHRS13	Q6UX07	377 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	ANO5	Q75V66	913 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	GAREM2	Q75VX8	874 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	CDR2L	Q86X02	465 aa	Predicted RBP	6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	ZNF713	Q8N859	430 aa	Predicted RBP	6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	BAHD1	Q8TBE0	780 aa	Predicted RBP	6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	IGDCC4	Q8TDY8	1250 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	ZDHHC1	Q8WTX9	485 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	HMGB4	Q8WW32	186 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	POLR3C	Q9BUI4	534 aa	Predicted RBP	6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	NRSN2	Q9GZP1	204 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	UNC45A	Q9H3U1	944 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	DHX33	Q9H6R0	707 aa	Known RBP	6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	GAREM1	Q9H706	876 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	ECT2	Q9H8V3	914 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	KIF9	Q9HAQ2	790 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	DIAPH3	Q9NSV4	1193 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	ZNF358	Q9NW07	568 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	ANK1	P16157	1881 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	ATM	Q13315	3056 aa		6.55	□□□□□ -1.36
KPNB1-209	ENST00000580158	MGA	Q8IWI9	3026 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	SERTM1	A2A2V5	107 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	HIP1	O00291	1037 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	TBX3	O15119	743 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	MSH4	O15457	936 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	NDUFS2	O75306	463 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	RECQL4	O94761	1208 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	AFP	P02771	609 aa	Known RBP	6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	CDK4	P11802	303 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	ARSA	P15289	507 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	MARCKS	P29966	332 aa	Predicted RBP	6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	CDC25C	P30307	473 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	IFNAR2	P48551	515 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	PDE1A	P54750	535 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	NPEPPS	P55786	919 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	SFSWAP	Q12872	951 aa	Known RBP	6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	NFATC3	Q12968	1075 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	RTP5	Q14D33	572 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	NAB2	Q15742	525 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	NKAPL	Q5M9Q1	402 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	WDR45B	Q5MNZ6	344 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	OTUD6A	Q7L8S5	288 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	CMTM8	Q8IZV2	173 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	TRIML1	Q8N9V2	468 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	TXNDC5	Q8NBS9	432 aa	Known RBP	6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	ZNF248	Q8NDW4	579 aa		6.54	□□□□□ -1.36

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