RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	TNPO1	Q92973	898 aa	Known RBP	4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	MRGPRX1	Q96LB2	322 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	ZNF830	Q96NB3	372 aa	Predicted RBP	4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	EIF2A	Q9BY44	585 aa	Known RBP	4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	ZNF518B	Q9C0D4	1074 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	ZCCHC4	Q9H5U6	513 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	ARFGAP3	Q9NP61	516 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	PPP4R1L	Q9P1A2	415 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	CPA4	Q9UI42	421 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	PCDHA6	Q9UN73	950 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	ZFR2	Q9UPR6	939 aa	Known RBP	4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	NEU2	Q9Y3R4	380 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	PLEKHM1	Q9Y4G2	1056 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	LRRC37A	A6NMS7	1700 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	PTPRC	P08575	1304 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	COL15A1	P39059	1388 aa		4.65	□□□□□ -1.67
MSI2-211	ENST00000579531	SETSIP	P0DME0	302 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	CYP2C9	P11712	490 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	NPR1	P16066	1061 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	BMP7	P18075	431 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	MSX2	P35548	267 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	FMO1	Q01740	532 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	PIGF	Q07326	219 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	SLC39A6	Q13433	755 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	ITPK1	Q13572	414 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	DAG1	Q14118	895 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	TWISTNB	Q3B726	338 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	HSP90AB3P	Q58FF7	597 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	TCTN3	Q6NUS6	607 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	HTR3D	Q70Z44	454 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	PTF1A	Q7RTS3	328 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	SDR16C5	Q8N3Y7	309 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	FBXO18	Q8NFZ0	1043 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	SLC35B2	Q8TB61	432 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	BRI3BP	Q8WY22	251 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	DCLRE1C	Q96SD1	692 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	LSM14B	Q9BX40	385 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	STK31	Q9BXU1	1019 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	PARD6A	Q9NPB6	346 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	STAP2	Q9UGK3	403 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	NARF	Q9UHQ1	456 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	RRP7A	Q9Y3A4	280 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	USP16	Q9Y5T5	823 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	SPEF2	Q9C093	1822 aa		4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	USP42	Q9H9J4	1324 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-211	ENST00000579531	TAF1	P21675	1872 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	TCRBV7S2A1N4T	A0A589	114 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	TRIM43B	A6NCK2	446 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	MYO1C	O00159	1063 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	IFRD1	O00458	451 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	SOAT2	O75908	522 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	INMT	O95050	263 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	DDX58	O95786	925 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	HSP90AA1	P07900	732 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	SPATA31D3	P0C874	917 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	KIT	P10721	976 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	COMT	P21964	271 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	RFC4	P35249	363 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	WNT3	P56703	355 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	RAP2B	P61225	183 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	NOMO3	P69849	1222 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	SATB1	Q01826	763 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	TCF15	Q12870	199 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	FOXL1	Q12952	345 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	FAM214A	Q32MH5	1076 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	RINL	Q6ZS11	566 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	SPATA31D4	Q6ZUB0	917 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	DEFB132	Q7Z7B7	95 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	DNAJC10	Q8IXB1	793 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	FUK	Q8N0W3	1084 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	OR2C3	Q8N628	320 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	SYT8	Q8NBV8	401 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	OR10H5	Q8NGA6	315 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	TMEM176A	Q96HP8	235 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	NT5C1B	Q96P26	610 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	MED15	Q96RN5	788 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	THUMPD2	Q9BTF0	503 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	CNPPD1	Q9BV87	410 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	C1orf43	Q9BWL3	253 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	BRIP1	Q9BX63	1249 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	XYLT2	Q9H1B5	865 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	SPON1	Q9HCB6	807 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	PLCB1	Q9NQ66	1216 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	TFCP2L1	Q9NZI6	479 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	SRRD	Q9UH36	339 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	DMTF1	Q9Y222	760 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	SH3BP1	Q9Y3L3	701 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	PNPLA7	Q6ZV29	1317 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	KIF16B	Q96L93	1317 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	CARMIL3	Q8ND23	1372 aa		4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	COL11A2	P13942	1736 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-211	ENST00000579531	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.62	□□□□□ -1.67
MSI2-211	ENST00000579531	MBD3L3	A6NE82	208 aa	Predicted RBP	4.62	□□□□□ -1.67
MSI2-211	ENST00000579531	PATE3	B3GLJ2	98 aa		4.62	□□□□□ -1.67
MSI2-211	ENST00000579531	BTN3A1	O00481	513 aa		4.62	□□□□□ -1.67

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