RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 MAGED2Q9UNF1 606 aaPredicted RBP12.03□□□□□ -0.48
SUPT4H1-203ENST00000579289 PCDHB5Q9Y5E4 795 aa12.03□□□□□ -0.48
SUPT4H1-203ENST00000579289 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.03□□□□□ -0.48
SUPT4H1-203ENST00000579289 HECTD1Q9ULT8 2610 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 PTPRQQ9UMZ3 2332 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 TRABD2BA6NFA1 517 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 OGTO15294 1046 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 HCRTO43612 131 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 ALDH1A2O94788 518 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 KAT7O95251 611 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 EIF2DP41214 584 aaKnown RBP12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 USP46P62068 366 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 PPP2R3AQ06190 1150 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 C19orf57Q0VDD7 668 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 ORC2Q13416 577 aaPredicted RBP12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 TRIM29Q14134 588 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 PDIA5Q14554 519 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 ARSHQ5FYA8 562 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 LARP1BQ659C4 914 aaKnown RBP12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 CRELD2Q6UXH1 353 aaPredicted RBP12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 OSTM1Q86WC4 334 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 ZNF843Q8N446 348 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 KIAA1958Q8N8K9 716 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 CCDC26Q8TAB7 109 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 ERMNQ8TAM6 284 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 HMGB4Q8WW32 186 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 EXOC4Q96A65 974 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 SPACA7Q96KW9 195 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 DRC1Q96MC2 740 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 PNMA5Q96PV4 448 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 LLPHQ9BRT6 129 aaKnown RBP12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 BRMS1Q9HCU9 246 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 CALCOCO1Q9P1Z2 691 aa12.02□□□□□ -0.49
SUPT4H1-203ENST00000579289 MUC22E2RYF6 1773 aaPredicted RBP12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 TRAV19A0A0A6YYK7 116 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 TCRBV21S2A2A0A5A6 115 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 LEFTY2O00292 366 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 ATXN7O15265 892 aaPredicted RBP12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 MAP3K13O43283 966 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 AP5Z1O43299 807 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 NFATC1O95644 943 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 RDXP35241 583 aaKnown RBP12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 TNFRSF4P43489 277 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 TOB1P50616 345 aaPredicted RBP12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 SLC7A9P82251 487 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 GUCY1B3Q02153 619 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 RPL6Q02878 288 aaKnown RBP12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 CYP4F3Q08477 520 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 RABEP1Q15276 862 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 HYIQ5T013 277 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 HAUS3Q68CZ6 603 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 LIMS2Q7Z4I7 341 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 FILIP1Q7Z7B0 1213 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 TTC30AQ86WT1 665 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 PDCL2Q8N4E4 241 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 C1orf216Q8TAB5 229 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 UBL7Q96S82 380 aaPredicted RBP12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 PNKPQ96T60 521 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 IL21RQ9HBE5 538 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 ABCB6Q9NP58 842 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 LRWD1Q9UFC0 647 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 DSEQ9UL01 958 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 L1RE1Q9UN81 338 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 DERAQ9Y315 318 aa12.01□□□□□ -0.49
SUPT4H1-203ENST00000579289 TCHHQ07283 1943 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 NPHP3-ACAD11A0A0J9YXS1 232 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 TISP43B9A030 160 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 ANKRD63C9JTQ0 380 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 TRIM24O15164 1050 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 PRPF40AO75400 957 aaKnown RBP12□□□□□ -0.49
SUPT4H1-203ENST00000579289 CKMP06732 381 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 ATXN1LP0C7T5 689 aaKnown RBP12□□□□□ -0.49
SUPT4H1-203ENST00000579289 HDCP19113 662 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 ITPKBP27987 946 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 GRIA2P42262 883 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 TAF6P49848 677 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 SLC12A3P55017 1021 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 RAD51AP2Q09MP3 1159 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 GRIK2Q13002 908 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 NR1H3Q13133 447 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 CFAP221Q4G0U5 840 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 EOGTQ5NDL2 527 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 FAM171BQ6P995 826 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 TRIML1Q8N9V2 468 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 SNX29Q8TEQ0 813 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 DNASE2BQ8WZ79 361 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 ZFRQ96KR1 1074 aaKnown RBP12□□□□□ -0.49
SUPT4H1-203ENST00000579289 ACBD6Q9BR61 282 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 PYM1Q9BRP8 204 aaKnown RBP12□□□□□ -0.49
SUPT4H1-203ENST00000579289 TIPINQ9BVW5 301 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 IKZF4Q9H2S9 585 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 RPF1Q9H9Y2 349 aaKnown RBP12□□□□□ -0.49
SUPT4H1-203ENST00000579289 UPF2Q9HAU5 1272 aaKnown RBP12□□□□□ -0.49
SUPT4H1-203ENST00000579289 TRPC7Q9HCX4 862 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 DNM3Q9UQ16 869 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 C2CD2Q9Y426 696 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 RAI2Q9Y5P3 530 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 COL12A1Q99715 3063 aa12□□□□□ -0.49
SUPT4H1-203ENST00000579289 MYH11P35749 1972 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms