RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 PIK3R5Q8WYR1 880 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 NELL2Q99435 816 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 RTKNQ9BST9 563 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 OSBPL6Q9BZF3 934 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 GUCA1BQ9UMX6 200 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 USP20Q9Y2K6 914 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 MRPS17Q9Y2R5 130 aaKnown RBP10.83□□□□□ -0.68
SS18-210ENST00000578700 COQ4Q9Y3A0 265 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 PCDHA13Q9Y5I0 950 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 RALGAPA1Q6GYQ0 2036 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 NOTCH4Q99466 2003 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 LAMA1P25391 3075 aa10.83□□□□□ -0.68
SS18-210ENST00000578700 A0A1B0GUA9 196 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 CTAGE9A4FU28 777 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 TBC1D4O60343 1298 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 LCA5LO95447 670 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 TNNC2P02585 160 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 RHOP08100 348 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 CLTAP09496 248 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 TMEM191BP0C7N4 346 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 IGFBP6P24592 240 aaPredicted RBP10.82□□□□□ -0.68
SS18-210ENST00000578700 USP8P40818 1118 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 MAGEA9P43362 315 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 ARPP19P56211 112 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 JAM2P57087 298 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 CLDN10P78369 228 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 POU5F1Q01860 360 aaKnown RBP10.82□□□□□ -0.68
SS18-210ENST00000578700 APBA1Q02410 837 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 ADCY1Q08828 1119 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 MTAPQ13126 283 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 TUBB2AQ13885 445 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 SLC18A3Q16572 532 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 IFI16Q16666 785 aaKnown RBP10.82□□□□□ -0.68
SS18-210ENST00000578700 ST3GAL2Q16842 350 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 DUOXA2Q1HG44 320 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 ZNF569Q5MCW4 686 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 C1orf220Q5T0J3 134 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 HGSNATQ68CP4 663 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 TANGO2Q6ICL3 276 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 SV2AQ7L0J3 742 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 ZSWIM2Q8NEG5 633 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 PLEKHO2Q8TD55 490 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 FAM212AQ96EL1 285 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 ANKRD36BP1Q96IX9 119 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 ZBTB45Q96K62 511 aaPredicted RBP10.82□□□□□ -0.68
SS18-210ENST00000578700 ALS2CR12Q96Q35 445 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 TUBB2BQ9BVA1 445 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 CXCL16Q9H2A7 254 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 EPC1Q9H2F5 836 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 RPF1Q9H9Y2 349 aaKnown RBP10.82□□□□□ -0.68
SS18-210ENST00000578700 PDE11AQ9HCR9 933 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 PARD6AQ9NPB6 346 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.82□□□□□ -0.68
SS18-210ENST00000578700 F5P12259 2224 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 VWA8A3KMH1 1905 aa10.82□□□□□ -0.68
SS18-210ENST00000578700 CNOT1A5YKK6 2376 aaKnown RBP10.81□□□□□ -0.68
SS18-210ENST00000578700 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.81□□□□□ -0.68
SS18-210ENST00000578700 PTGESO14684 152 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 LILRB5O75023 590 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 TACC1O75410 805 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 B3GAT3O94766 335 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 PLEKP08567 350 aaPredicted RBP10.81□□□□□ -0.68
SS18-210ENST00000578700 TBXAS1P24557 533 aaPredicted RBP10.81□□□□□ -0.68
SS18-210ENST00000578700 HOXA9P31269 272 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 ELF1P32519 619 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 NAP1L1P55209 391 aaKnown RBP10.81□□□□□ -0.68
SS18-210ENST00000578700 BPIFB4P59827 614 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 CYP27A1Q02318 531 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 GCNT1Q02742 428 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 PTK2Q05397 1052 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 GFPT1Q06210 699 aaPredicted RBP10.81□□□□□ -0.68
SS18-210ENST00000578700 ELAVL2Q12926 359 aaKnown RBP10.81□□□□□ -0.68
SS18-210ENST00000578700 TRPC3Q13507 836 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 RAB33AQ14088 237 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 DCAF4L1Q3SXM0 396 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 GJB7Q6PEY0 223 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 IRF2BP2Q7Z5L9 587 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 LMO3Q8TAP4 145 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 TAS1R2Q8TE23 839 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 CLDN23Q96B33 292 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 CCDC94Q9BW85 323 aaPredicted RBP10.81□□□□□ -0.68
SS18-210ENST00000578700 BRD9Q9H8M2 597 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 LMAN1LQ9HAT1 526 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 CPSF3Q9UKF6 684 aaKnown RBP10.81□□□□□ -0.68
SS18-210ENST00000578700 CDY1Q9Y6F8 540 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 TRIP11Q15643 1979 aa10.81□□□□□ -0.68
SS18-210ENST00000578700 TTLL13PA6NNM8 815 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 I3L4J1 428 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 ECI2O75521 394 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 RECQL4O94761 1208 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 URI1O94763 535 aaPredicted RBP10.8□□□□□ -0.68
SS18-210ENST00000578700 HLA-DRAP01903 254 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 LRG1P02750 347 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 CEBPBP17676 345 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 PTPN2P17706 415 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 TNFAIP3P21580 790 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 TGM1P22735 817 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 PROZP22891 400 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 YARSP54577 528 aaKnown RBP10.8□□□□□ -0.68
SS18-210ENST00000578700 NRLP54845 237 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms