RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 ZNF292O60281 2723 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 NUP210Q8TEM1 1887 aaPredicted RBP14.86□□□□□ -0.03
PSMD11-207ENST00000578397 TICRRQ7Z2Z1 1910 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 A0A1W2PQ27 194 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 A0A1W2PQ64 194 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 A0A1W2PQD8 194 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 LRRIQ3A6PVS8 624 aaPredicted RBP14.86□□□□□ -0.03
PSMD11-207ENST00000578397 A8MXQ7 604 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 C4BPAP04003 597 aaKnown RBP14.86□□□□□ -0.03
PSMD11-207ENST00000578397 NR3C1P04150 777 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 CKMP06732 381 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 TCF3P15923 654 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 PPP3CCP48454 512 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 CASP4P49662 377 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 NDUFA8P51970 172 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 NOP14P78316 857 aaKnown RBP14.86□□□□□ -0.03
PSMD11-207ENST00000578397 NCOA4Q13772 614 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 MTF1Q14872 753 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 WDR44Q5JSH3 913 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 TDRD10Q5VZ19 366 aaKnown RBP14.86□□□□□ -0.03
PSMD11-207ENST00000578397 TMC2Q8TDI7 906 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 EXOC4Q96A65 974 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 ELOVL4Q9GZR5 314 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 EBF3Q9H4W6 596 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 RBM12Q9NTZ6 932 aaKnown RBP14.86□□□□□ -0.03
PSMD11-207ENST00000578397 TRPM5Q9NZQ8 1165 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 GCNT4Q9P109 453 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 NME7Q9Y5B8 376 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 PATJQ8NI35 1801 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 FANCMQ8IYD8 2048 aa14.86□□□□□ -0.03
PSMD11-207ENST00000578397 F8VP50 259 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 TRDMT1O14717 391 aaKnown RBP14.85□□□□□ -0.03
PSMD11-207ENST00000578397 IKBKBO14920 756 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 MAPK13O15264 365 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 CALUO43852 315 aaPredicted RBP14.85□□□□□ -0.03
PSMD11-207ENST00000578397 RHOBTB3O94955 611 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 HDCP19113 662 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 HOXA6P31267 233 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 SATB1Q01826 763 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 USP4Q13107 963 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 KCNB1Q14721 858 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 ZNF77Q15935 545 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 ZNF699Q32M78 642 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 ZNF667Q5HYK9 610 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 TMEM196Q5HYL7 178 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 TRIM68Q6AZZ1 485 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 ARL14EPQ8N8R7 260 aaPredicted RBP14.85□□□□□ -0.03
PSMD11-207ENST00000578397 B3GALNT2Q8NCR0 500 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 RIN3Q8TB24 985 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 TAF4BQ92750 862 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 SECISBP2LQ93073 1101 aaKnown RBP14.85□□□□□ -0.03
PSMD11-207ENST00000578397 SLC22A12Q96S37 553 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 CYP2S1Q96SQ9 504 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 NCDNQ9UBB6 729 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 ARHGAP26Q9UNA1 814 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 SMG5Q9UPR3 1016 aaKnown RBP14.85□□□□□ -0.03
PSMD11-207ENST00000578397 TRAF3IP3Q9Y228 551 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 FRMD4BQ9Y2L6 1034 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 WDR87Q6ZQQ6 2873 aa14.85□□□□□ -0.03
PSMD11-207ENST00000578397 OTOL1A6NHN0 477 aaPredicted RBP14.84□□□□□ -0.03
PSMD11-207ENST00000578397 P4HA1P13674 534 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 ARSAP15289 507 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 ID4P47928 161 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 USP46P62068 366 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 GRSF1Q12849 480 aaKnown RBP eCLIP14.84□□□□□ -0.03
PSMD11-207ENST00000578397 NFIL3Q16649 462 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 SGSM1Q2NKQ1 1148 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 ZACNQ401N2 412 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 Q6ZS52 159 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 CPA6Q8N4T0 437 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 GPR161Q8N6U8 529 aaKnown RBP14.84□□□□□ -0.03
PSMD11-207ENST00000578397 KIAA1958Q8N8K9 716 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 OSCP1Q8WVF1 389 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 ATP2A3Q93084 1043 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 CCDC34Q96HJ3 373 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 CHAMP1Q96JM3 812 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 TNIP3Q96KP6 325 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 ZNF518BQ9C0D4 1074 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 DPEP3Q9H4B8 488 aa14.84□□□□□ -0.03
PSMD11-207ENST00000578397 DUS2Q9NX74 493 aaKnown RBP14.84□□□□□ -0.03
PSMD11-207ENST00000578397 C2orf78A6NCI8 922 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 K7ESF4 209 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 VNN1O95497 513 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 CNR2P34972 360 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 IFNAR2P48551 515 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 FOXK2Q01167 660 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 DPYDQ12882 1025 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 NR1H3Q13133 447 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 CEP135Q66GS9 1140 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 KRBA2Q6ZNG9 492 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 SV2AQ7L0J3 742 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 KIAA2013Q8IYS2 634 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 GUF1Q8N442 669 aaKnown RBP14.83□□□□□ -0.04
PSMD11-207ENST00000578397 DCLK2Q8N568 766 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 SH3RF2Q8TEC5 729 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 SLITRK1Q96PX8 696 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 B3GNT5Q9BYG0 378 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 SMYD3Q9H7B4 428 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 ECT2Q9H8V3 914 aa14.83□□□□□ -0.04
PSMD11-207ENST00000578397 RAB23Q9ULC3 237 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms