RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 GPRIN1Q7Z2K8 1008 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 PIGZQ86VD9 579 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 CREG2Q8IUH2 290 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 FEZF2Q8TBJ5 459 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 CALR3Q96L12 384 aaKnown RBP13.83□□□□□ -0.2
CTC1-203ENST00000578240 CARD6Q9BX69 1037 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 DUSP16Q9BY84 665 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 UBE2OQ9C0C9 1292 aaKnown RBP13.83□□□□□ -0.2
CTC1-203ENST00000578240 ST7Q9NRC1 585 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 FAN1Q9Y2M0 1017 aa13.83□□□□□ -0.2
CTC1-203ENST00000578240 MRPL42Q9Y6G3 142 aaKnown RBP13.83□□□□□ -0.2
CTC1-203ENST00000578240 HHLA1C9JL84 531 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 EFCAB14O75071 495 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 PROSCO94903 275 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 RFC1P35251 1148 aaPredicted RBP13.82□□□□□ -0.2
CTC1-203ENST00000578240 FPGSQ05932 587 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 ZNF268Q14587 947 aaPredicted RBP13.82□□□□□ -0.2
CTC1-203ENST00000578240 RSPO2Q6UXX9 243 aaPredicted RBP13.82□□□□□ -0.2
CTC1-203ENST00000578240 ZNF365Q70YC5 407 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 TAS1R1Q7RTX1 841 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 METTL23Q86XA0 190 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 EMC1Q8N766 993 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 MYRIPQ8NFW9 859 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 IPO4Q8TEX9 1081 aaKnown RBP13.82□□□□□ -0.2
CTC1-203ENST00000578240 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.82□□□□□ -0.2
CTC1-203ENST00000578240 ZCWPW1Q9H0M4 648 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 MRPL47Q9HD33 250 aaKnown RBP13.82□□□□□ -0.2
CTC1-203ENST00000578240 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
CTC1-203ENST00000578240 TMEM59LQ9UK28 342 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 DOCK6Q96HP0 2047 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 SF3B1O75533 1304 aaKnown RBP eCLIP13.82□□□□□ -0.2
CTC1-203ENST00000578240 MYO7AQ13402 2215 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 SIGLEC16A6NMB1 481 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 TBC1D4O60343 1298 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 TADA2AO75478 443 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 CTNNA1P35221 906 aaKnown RBP13.82□□□□□ -0.2
CTC1-203ENST00000578240 FLT3P36888 993 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 PEX5P50542 639 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 TAS2R40P59535 323 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 ADCY1Q08828 1119 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 PPIGQ13427 754 aaKnown RBP eCLIP13.82□□□□□ -0.25e-6■■□□□ 13.5
CTC1-203ENST00000578240 TAF5Q15542 800 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 TMEM240Q5SV17 173 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 FAM171A1Q5VUB5 890 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 CMTR2Q8IYT2 770 aaKnown RBP13.82□□□□□ -0.2
CTC1-203ENST00000578240 ARFGAP1Q8N6T3 406 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 CAPZA3Q96KX2 299 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 KCNK16Q96T55 309 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 COLEC11Q9BWP8 271 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 ADAM33Q9BZ11 813 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 CSNK1G1Q9HCP0 422 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 CYLDQ9NQC7 956 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 WDR35Q9P2L0 1181 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 AMFRQ9UKV5 643 aa13.82□□□□□ -0.2
CTC1-203ENST00000578240 ARHGEF37A1IGU5 675 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 TADA3O75528 432 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 AP1G2O75843 785 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 VNN2O95498 520 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 ALDH2P05091 517 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 FAM200BP0CF97 657 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 TCP1P17987 556 aaKnown RBP13.81□□□□□ -0.2
CTC1-203ENST00000578240 MAN1A1P33908 653 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 GTF2F1P35269 517 aaKnown RBP eCLIP13.81□□□□□ -0.2
CTC1-203ENST00000578240 MAP3K7CLP57077 242 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 HTRA4P83105 476 aaPredicted RBP13.81□□□□□ -0.2
CTC1-203ENST00000578240 ADIGQ0VDE8 80 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 RPS6KA1Q15418 735 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 WHAMMP3Q1A5X7 153 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 RAB6CQ53S08 254 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 FAM102AQ5T9C2 384 aaPredicted RBP13.81□□□□□ -0.2
CTC1-203ENST00000578240 BHLHA9Q7RTU4 235 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 TDHQ8IZJ6 230 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 MSANTD4Q8NCY6 345 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 SMARCD1Q96GM5 515 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 IGSF21Q96ID5 467 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 MS4A14Q96JA4 679 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 SELENOOQ9BVL4 669 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 RAB6CQ9H0N0 254 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 SYNCQ9H7C4 482 aa13.81□□□□□ -0.2
CTC1-203ENST00000578240 F8VP50 259 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 KCNK3O14649 394 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 CTIFO43310 598 aaKnown RBP13.8□□□□□ -0.2
CTC1-203ENST00000578240 TRAPPC3O43617 180 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 GRAP2O75791 330 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 SLU7O95391 586 aaKnown RBP13.8□□□□□ -0.2
CTC1-203ENST00000578240 KRT3P12035 628 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 BDNFP23560 247 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 CTNNA2P26232 953 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 RAB41Q5JT25 222 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 OR6B2Q6IFH4 312 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 AADACL2Q6P093 401 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 KCNT2Q6UVM3 1135 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 ZNF572Q7Z3I7 529 aaPredicted RBP13.8□□□□□ -0.2
CTC1-203ENST00000578240 SCUBE3Q8IX30 993 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 SLC39A11Q8N1S5 342 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 FNIP1Q8TF40 1166 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 KCTD13Q8WZ19 329 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 HSFY1Q96LI6 401 aa13.8□□□□□ -0.2
CTC1-203ENST00000578240 MED10Q9BTT4 135 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms