RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SOWAHAQ2M3V2 549 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 SNX30Q5VWJ9 437 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 CYP2U1Q7Z449 544 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 MYCBPAPQ8TBZ2 947 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 HHIPQ96QV1 700 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 ELOVL4Q9GZR5 314 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 TRPC7Q9HCX4 862 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 SIX4Q9UIU6 781 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 GTF3C4Q9UKN8 822 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 TNRC6BQ9UPQ9 1833 aaKnown RBP12□□□□□ -0.49
SMARCE1-214ENST00000578112 OPRD1P41143 372 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 GPR15P49685 360 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 AP3M2P53677 418 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 E2F5Q15329 346 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 DDR2Q16832 855 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 MYLPFQ96A32 169 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 HPDLQ96IR7 371 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 PNKPQ96T60 521 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 PANK4Q9NVE7 773 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 SPAG17Q6Q759 2223 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 E2F8A0AVK6 867 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 TISP43B9A030 160 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 LEFTY2O00292 366 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 APODP05090 189 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 AMPD3Q01432 767 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 SLC36A4Q6YBV0 504 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 C12orf56Q8IXR9 622 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 STKLD1Q8NE28 680 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 CEP76Q8TAP6 659 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 RIN3Q8TB24 985 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 WHAMMQ8TF30 809 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 EZH1Q92800 747 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 ZSCAN16Q9H4T2 348 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 VRTNQ9H8Y1 702 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 OAS1P00973 400 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 STAT6P42226 847 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 GRIA2P42262 883 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 GRIN1Q05586 938 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 TDRD10Q5VZ19 366 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 LPCAT2Q7L5N7 544 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 DYMQ7RTS9 669 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 SCN4BQ8IWT1 228 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 ARL14EPQ8N8R7 260 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 KBTBD7Q8WVZ9 684 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 SLITRK1Q96PX8 696 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 WNT6Q9Y6F9 365 aa11.99□□□□□ -0.49
SMARCE1-214ENST00000578112 ZNF840PA6NDX5 716 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 K7EQS6 105 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 KRT19P08727 400 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 GAD2Q05329 585 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 CRY1Q16526 586 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 GAB4Q2WGN9 574 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 GPIHBP1Q8IV16 184 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 TMEM174Q8WUU8 243 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 SAAL1Q96ER3 474 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 EPSTI1Q96J88 318 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 CGRRF1Q99675 332 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 MTMR12Q9C0I1 747 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 SNX25Q9H3E2 840 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 SLC32A1Q9H598 525 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 FBRSL1Q9HCM7 1045 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 CEP250Q9BV73 2442 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 H0Y626 953 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 HOXC11O43248 304 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 TRIM16O95361 564 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 CYP17A1P05093 508 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 CHRM1P11229 460 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 GRIK1P39086 918 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 P2RY2P41231 377 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 CREB5Q02930 508 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 PSMD6Q15008 389 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 INTS4Q96HW7 963 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 CRTAC1Q9NQ79 661 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 IL37Q9NZH6 218 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 NEUROG3Q9Y4Z2 214 aa11.98□□□□□ -0.49
SMARCE1-214ENST00000578112 ACAT1P24752 427 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 NOVA1P51513 510 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 RESTQ13127 1097 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 SLC39A14Q15043 492 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 SLC23A3Q6PIS1 610 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 SYT12Q8IV01 421 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 ZNF507Q8TCN5 953 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 CBWD1Q9BRT8 395 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 NUSAP1Q9BXS6 441 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 PDE11AQ9HCR9 933 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 GPR179Q6PRD1 2367 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 PRPF6O94906 941 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 RDXP35241 583 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 WNT7BP56706 349 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 DHCR24Q15392 516 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 EPM2AIP1Q7L775 607 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 ADGRG2Q8IZP9 1017 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 GOLGA5Q8TBA6 731 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 SLC22A12Q96S37 553 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 HSPBP1Q9NZL4 362 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 WASF3Q9UPY6 502 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 CLIC4Q9Y696 253 aa11.97□□□□□ -0.49
SMARCE1-214ENST00000578112 LNP1A1A4G5 178 aa11.96□□□□□ -0.49
SMARCE1-214ENST00000578112 FAM92AA1XBS5 289 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms