RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 CST3P01034 146 aaPredicted RBP17.1■□□□□ 0.33
VAPA-204ENST00000577901 F11P03951 625 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 KRT13P13646 458 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 HMGA1P17096 107 aaKnown RBP17.1■□□□□ 0.33
VAPA-204ENST00000577901 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.33
VAPA-204ENST00000577901 VAMP7P51809 220 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 GRSF1Q12849 480 aaKnown RBP eCLIP17.1■□□□□ 0.33
VAPA-204ENST00000577901 BIRC3Q13489 604 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 RUNX3Q13761 415 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 ZCWPW2Q504Y3 356 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 TMEM196Q5HYL7 178 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 SCARA3Q6AZY7 606 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 TRIM68Q6AZZ1 485 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 FSTL4Q6MZW2 842 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 PKN3Q6P5Z2 889 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 INTS8Q75QN2 995 aaKnown RBP17.1■□□□□ 0.33
VAPA-204ENST00000577901 FAM186BQ8IYM0 893 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 PDCL2Q8N4E4 241 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 GAB3Q8WWW8 586 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 USP13Q92995 863 aaPredicted RBP17.1■□□□□ 0.33
VAPA-204ENST00000577901 GBP4Q96PP9 640 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 EBF3Q9H4W6 596 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 HPS4Q9NQG7 708 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 TDP1Q9NUW8 608 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 OTOL1A6NHN0 477 aaPredicted RBP17.09■□□□□ 0.33
VAPA-204ENST00000577901 PSMA7O14818 248 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 ATG13O75143 517 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 AKAP3O75969 853 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 ATICP31939 592 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 LHX1P48742 406 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 PXNP49023 591 aaPredicted RBP17.09■□□□□ 0.33
VAPA-204ENST00000577901 MYL7Q01449 175 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 TSPY1Q01534 308 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 ENPEPQ07075 957 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 TXNDC8Q6A555 127 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 CACNA2D4Q7Z3S7 1137 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 PLEKHO2Q8TD55 490 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 SYAP1Q96A49 352 aaPredicted RBP17.09■□□□□ 0.33
VAPA-204ENST00000577901 CHFRQ96EP1 664 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 DHTKD1Q96HY7 919 aaPredicted RBP17.09■□□□□ 0.33
VAPA-204ENST00000577901 MMS19Q96T76 1030 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 PI4K2AQ9BTU6 479 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 GZF1Q9H116 711 aaPredicted RBP17.09■□□□□ 0.33
VAPA-204ENST00000577901 ARRDC1-AS1Q9H2J1 176 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 TMLHEQ9NVH6 421 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 DDX43Q9NXZ2 648 aaKnown RBP17.09■□□□□ 0.33
VAPA-204ENST00000577901 L1RE1Q9UN81 338 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 MAGED2Q9UNF1 606 aaPredicted RBP17.09■□□□□ 0.33
VAPA-204ENST00000577901 SLC8A2Q9UPR5 921 aa17.09■□□□□ 0.33
VAPA-204ENST00000577901 KMT2BQ9UMN6 2715 aaPredicted RBP17.09■□□□□ 0.33
VAPA-204ENST00000577901 CCDC163A0A0D9SF12 145 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 RPP40O75818 363 aaKnown RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 STAU1O95793 577 aaKnown RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 C4BPAP04003 597 aaKnown RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 GPR15P49685 360 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 TNNC1P63316 161 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 DLG4P78352 724 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 FKBP3Q00688 224 aaKnown RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 AMPD2Q01433 879 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 LRRC63Q05C16 580 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 SOWAHAQ2M3V2 549 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 AASDHQ4L235 1098 aaPredicted RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 ANKRD40Q6AI12 368 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 CC2D1AQ6P1N0 951 aaPredicted RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 MON1AQ86VX9 555 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 ADGRF2Q8IZF7 708 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 STKLD1Q8NE28 680 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 DDX1Q92499 740 aaKnown RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 MRPS31Q92665 395 aaKnown RBP17.08■□□□□ 0.32
VAPA-204ENST00000577901 LOXL4Q96JB6 756 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 ACBD6Q9BR61 282 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 KIF9Q9HAQ2 790 aa17.08■□□□□ 0.32
VAPA-204ENST00000577901 KIF26AQ9ULI4 1882 aaPredicted RBP17.07■□□□□ 0.32
VAPA-204ENST00000577901 EPG5Q9HCE0 2579 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 CLSTN1O94985 981 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 EGFP01133 1207 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 FAM163BP0C2L3 166 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 CSH1P0DML2 217 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 CSH2P0DML3 217 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 ARSAP15289 507 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 PCSK1P29120 753 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 MYL6P60660 151 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 NCOA4Q13772 614 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 MORC3Q14149 939 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 SF3A2Q15428 464 aaKnown RBP17.07■□□□□ 0.32
VAPA-204ENST00000577901 CCDC6Q16204 474 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 CAMK4Q16566 473 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 NFE2Q16621 373 aaPredicted RBP17.07■□□□□ 0.32
VAPA-204ENST00000577901 WDR72Q3MJ13 1102 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 TDRD10Q5VZ19 366 aaKnown RBP17.07■□□□□ 0.32
VAPA-204ENST00000577901 IL31Q6EBC2 164 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 KBTBD6Q86V97 674 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 TRIML1Q8N9V2 468 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 C12orf50Q8NA57 414 aaPredicted RBP17.07■□□□□ 0.32
VAPA-204ENST00000577901 RIN3Q8TB24 985 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms