RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 WSCD1Q658N2 575 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 DENND1BQ6P3S1 775 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 DSTYKQ6XUX3 929 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 NYAP1Q6ZVC0 841 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 PHLDB2Q86SQ0 1253 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 ACOT1Q86TX2 421 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 NPAS4Q8IUM7 802 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 ADGRF2Q8IZF7 708 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 ABI1Q8IZP0 508 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 PDCL2Q8N4E4 241 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 OR6B3Q8NGW1 331 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 SPPL3Q8TCT6 385 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 KBTBD7Q8WVZ9 684 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 SECISBP2LQ93073 1101 aaKnown RBP10.68□□□□□ -0.7
CRLF3-202ENST00000577725 ARHGEF26Q96DR7 871 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 CDCA3Q99618 268 aaPredicted RBP10.68□□□□□ -0.7
CRLF3-202ENST00000577725 PDCL3Q9H2J4 239 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 SNX25Q9H3E2 840 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 ELAC1Q9H777 363 aaKnown RBP10.68□□□□□ -0.7
CRLF3-202ENST00000577725 CHORDC1Q9UHD1 332 aaPredicted RBP10.68□□□□□ -0.7
CRLF3-202ENST00000577725 OTOGLQ3ZCN5 2332 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 NLRC5Q86WI3 1866 aa10.68□□□□□ -0.7
CRLF3-202ENST00000577725 ATMINO43313 823 aaPredicted RBP10.67□□□□□ -0.7
CRLF3-202ENST00000577725 BUB1O43683 1085 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 HUS1O60921 280 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 KIF4AO95239 1232 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 MOCS3O95396 460 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 ASGR2P07307 311 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 H2AFZP0C0S5 128 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 SP9P0CG40 484 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 TNNT1P13805 278 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 ACAT1P24752 427 aaKnown RBP10.67□□□□□ -0.7
CRLF3-202ENST00000577725 LMO2P25791 158 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 RPL9P32969 192 aaKnown RBP10.67□□□□□ -0.7
CRLF3-202ENST00000577725 OR1G1P47890 313 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 GALCP54803 685 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 BCAR1P56945 870 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 RBM10P98175 930 aaKnown RBP10.67□□□□□ -0.7
CRLF3-202ENST00000577725 BTG3Q14201 252 aaPredicted RBP10.67□□□□□ -0.7
CRLF3-202ENST00000577725 PTPN14Q15678 1187 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 LLGL2Q6P1M3 1020 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 H2AFVQ71UI9 128 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 COLGALT2Q8IYK4 626 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 APPL2Q8NEU8 664 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 VN1R2Q8NFZ6 395 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 POF1BQ8WVV4 589 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 ZNF606Q8WXB4 792 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 CPA5Q8WXQ8 436 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 ZNF592Q92610 1267 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 CYFIP2Q96F07 1278 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 TMEM176AQ96HP8 235 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 HEXIM2Q96MH2 286 aaKnown RBP10.67□□□□□ -0.7
CRLF3-202ENST00000577725 FAM193BQ96PV7 902 aaPredicted RBP10.67□□□□□ -0.7
CRLF3-202ENST00000577725 NRDE2Q9H7Z3 1164 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 RC3H2Q9HBD1 1191 aaKnown RBP10.67□□□□□ -0.7
CRLF3-202ENST00000577725 FAM49BQ9NUQ9 324 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 GDAP2Q9NXN4 497 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 SALL4Q9UJQ4 1053 aa10.67□□□□□ -0.7
CRLF3-202ENST00000577725 MYH10P35580 1976 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 MYO7AQ13402 2215 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 GOLGA6L9A6NEM1 432 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 A8MXQ7 604 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 PER2O15055 1255 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 FANCGO15287 622 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 PJA2O43164 708 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 B3GAT3O94766 335 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 MICAL2O94851 1124 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 FTLP02792 175 aaPredicted RBP10.66□□□□□ -0.7
CRLF3-202ENST00000577725 PAEPP09466 180 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 WARSP23381 471 aaKnown RBP10.66□□□□□ -0.7
CRLF3-202ENST00000577725 GNL1P36915 607 aaPredicted RBP10.66□□□□□ -0.7
CRLF3-202ENST00000577725 PBX3P40426 434 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 SLC11A1P49279 550 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 GNG11P61952 73 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 PSMC1P62191 440 aaKnown RBP10.66□□□□□ -0.7
CRLF3-202ENST00000577725 SHC2P98077 582 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 DSC1Q08554 894 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 KIF5AQ12840 1032 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 GOLGA7BQ2TAP0 167 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 C2CD6Q53TS8 623 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 ZNF569Q5MCW4 686 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 DNTTIP2Q5QJE6 756 aaKnown RBP10.66□□□□□ -0.7
CRLF3-202ENST00000577725 ACAD10Q6JQN1 1059 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 ANKRD54Q6NXT1 300 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 SYT10Q6XYQ8 523 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 TMEM184AQ6ZMB5 413 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 LIMS2Q7Z4I7 341 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 ZNF677Q86XU0 584 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 SLC35F6Q8N357 371 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 TOP6BLQ8N6T0 577 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 C12orf29Q8N999 325 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 C1orf131Q8NDD1 294 aaKnown RBP10.66□□□□□ -0.7
CRLF3-202ENST00000577725 UBA3Q8TBC4 463 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
CRLF3-202ENST00000577725 FAXDC2Q96IV6 333 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 UROC1Q96N76 676 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 NECTIN4Q96NY8 510 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 WDR24Q96S15 920 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 NT5C1AQ9BXI3 368 aa10.66□□□□□ -0.7
CRLF3-202ENST00000577725 THAP2Q9H0W7 228 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms