RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 ACAP3Q96P50 834 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 CDRT15Q96T59 188 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 VPS33BQ9H267 617 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 KCNN2Q9H2S1 579 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 RNF41Q9H4P4 317 aaPredicted RBP8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 HMX1Q9NP08 348 aaPredicted RBP8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 KCNK9Q9NPC2 374 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 AGPAT5Q9NUQ2 364 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 TMOD2Q9NZR1 351 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 EMC3Q9P0I2 261 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 ARHGAP20Q9P2F6 1191 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 ATP6V1HQ9UI12 483 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 GRID1Q9ULK0 1009 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 NEU2Q9Y3R4 380 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 RWDD3Q9Y3V2 267 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 AHDC1Q5TGY3 1603 aaPredicted RBP8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 ZNF532Q9HCE3 1301 aa8.3□□□□□ -1.08
TOM1L1-220ENST00000575333 F6X3S4 739 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 H3BSA7 217 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 KCNK3O14649 394 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 TTLL1O95922 423 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 MYCP01106 439 aaPredicted RBP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 TFPTP0C1Z6 253 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 SRGAP2CP0DJJ0 459 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 KRT3P12035 628 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 HSPA6P17066 643 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ATF6P18850 670 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ITGAXP20702 1163 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 KRT20P35900 424 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 GRIK1P39086 918 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 HAAOP46952 286 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ZNF135P52742 658 aaPredicted RBP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 AP2S1P53680 142 aaPredicted RBP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 AQP4P55087 323 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 PTENP60484 403 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 EFTUD2Q15029 972 aaKnown RBP eCLIP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 PDK4Q16654 411 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 SMU1Q2TAY7 513 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 LEXMQ3ZCV2 418 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 C5orf22Q49AR2 442 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 SFT2D3Q587I9 215 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ZBTB41Q5SVQ8 909 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ZCCHC8Q6NZY4 707 aaKnown RBP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ZNF600Q6ZNG1 722 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 LINC00299Q6ZSB3 139 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 CENPUQ71F23 418 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 KRT26Q7Z3Y9 468 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 PRUNE1Q86TP1 453 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 GPR180Q86V85 440 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 AADATQ8N5Z0 425 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ANKRD42Q8N9B4 389 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 SIMC1Q8NDZ2 872 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 RFWD2Q8NHY2 731 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 SLC2A14Q8TDB8 520 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 EPS8L3Q8TE67 593 aaKnown RBP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 GDPD5Q8WTR4 605 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 CAPSLQ8WWF8 208 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 PAGE5Q96GU1 130 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 FAM161BQ96MY7 647 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 RANBP9Q96S59 729 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 MYD88Q99836 296 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 C1orf50Q9BV19 199 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 GON7Q9BXV9 100 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 TRIM15Q9C019 465 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 HOXD1Q9GZZ0 328 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 USP44Q9H0E7 712 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 THG1LQ9NWX6 298 aaKnown RBP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 TMEM9Q9P0T7 183 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 SENP1Q9P0U3 644 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 MYH4Q9Y623 1939 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ABCB11O95342 1321 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 FLT1P17948 1338 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 RPTORQ8N122 1335 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 COL16A1Q07092 1604 aaPredicted RBP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 PSME4Q14997 1843 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 OR5K3A6NET4 321 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 FAM47DPA6NHR8 397 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 INO80B-WBP1J3KQ70 363 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 VWA5AO00534 786 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 PODXLO00592 558 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 IRS4O14654 1257 aaPredicted RBP8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 MTSS1O43312 755 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 EXTL3O43909 919 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 UGT1A9O60656 530 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 OR5F1O95221 314 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 BMP10O95393 424 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 ADH1BP00325 375 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 UGT1A6P19224 532 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 UGT1A1P22309 533 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 UGT1A4P22310 534 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 AMPD1P23109 780 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 UGT1A3P35503 534 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 UGT1A5P35504 534 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 STAT3P40763 770 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 SLC26A3P40879 764 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 POLD2P49005 469 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 IGBP1P78318 339 aa8.29□□□□□ -1.08
TOM1L1-220ENST00000575333 PHC1P78364 1004 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms