RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 AP3M2P53677 418 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 USP46P62068 366 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 NUCB2P80303 420 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 FCHO2Q0JRZ9 810 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 ORC1Q13415 861 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 ZNF667Q5HYK9 610 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 C1orf220Q5T0J3 134 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 SPOPLQ6IQ16 392 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 ASCL5Q7RTU5 278 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 C1orf210Q8IVY1 113 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 FAM186BQ8IYM0 893 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 CMTM8Q8IZV2 173 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 FMR1NBQ8N0W7 255 aaPredicted RBP10.65□□□□□ -0.7
RPA1-206ENST00000573994 RIN3Q8TB24 985 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 MYCBPAPQ8TBZ2 947 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 BPIFB1Q8TDL5 484 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 CSGALNACT1Q8TDX6 532 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 MRPS31Q92665 395 aaKnown RBP10.65□□□□□ -0.7
RPA1-206ENST00000573994 EEF2KMTQ96G04 330 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 NELL2Q99435 816 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 ZNF518BQ9C0D4 1074 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 SDCBP2Q9H190 292 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 MMRN2Q9H8L6 949 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 TRPV5Q9NQA5 729 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 TMEM30AQ9NV96 361 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 GTSE1Q9NYZ3 720 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 MAGEC2Q9UBF1 373 aaPredicted RBP10.65□□□□□ -0.7
RPA1-206ENST00000573994 MRPS17Q9Y2R5 130 aaKnown RBP10.65□□□□□ -0.7
RPA1-206ENST00000573994 PRR23AA6NEV1 266 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 SOBPA7XYQ1 873 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 F8VP50 259 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 HLA-DRAP01903 254 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 PTPN1P18031 435 aaKnown RBP10.64□□□□□ -0.71
RPA1-206ENST00000573994 ANXA13P27216 316 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 WEE1P30291 646 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 GCLMP48507 274 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 CLDN10P78369 228 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 IFRD2Q12894 506 aaPredicted RBP10.64□□□□□ -0.71
RPA1-206ENST00000573994 KCNB1Q14721 858 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 MAPRE1Q15691 268 aaKnown RBP10.64□□□□□ -0.71
RPA1-206ENST00000573994 ZACNQ401N2 412 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 TRIM68Q6AZZ1 485 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 TXNDC11Q6PKC3 985 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 SV2AQ7L0J3 742 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 MAML2Q8IZL2 1156 aaPredicted RBP10.64□□□□□ -0.71
RPA1-206ENST00000573994 GUF1Q8N442 669 aaKnown RBP10.64□□□□□ -0.71
RPA1-206ENST00000573994 B3GALNT2Q8NCR0 500 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 FAM3CQ92520 227 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 USP13Q92995 863 aaPredicted RBP10.64□□□□□ -0.71
RPA1-206ENST00000573994 TRMT2BQ96GJ1 504 aaKnown RBP10.64□□□□□ -0.71
RPA1-206ENST00000573994 CEP295NLQ96MC4 621 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 SLC22A12Q96S37 553 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 B3GNT5Q9BYG0 378 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 OSBPL6Q9BZF3 934 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 OBP2AQ9NY56 170 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 UXTQ9UBK9 157 aaPredicted RBP10.64□□□□□ -0.71
RPA1-206ENST00000573994 HMGXB4Q9UGU5 601 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 TRAF3IP3Q9Y228 551 aa10.64□□□□□ -0.71
RPA1-206ENST00000573994 CFAP54Q96N23 3096 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 C2orf78A6NCI8 922 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 SPECC1L-ADORA2AF8WAN1 911 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 MAN2B1O00754 1011 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 TRIM66O15016 1216 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 LAMTOR5O43504 91 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 CKMP06732 381 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 SP9P0CG40 484 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 DDX6P26196 483 aaKnown RBP eCLIP10.63□□□□□ -0.71
RPA1-206ENST00000573994 MAGEA9P43362 315 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 VAMP7P51809 220 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 MLLT6P55198 1093 aaPredicted RBP10.63□□□□□ -0.71
RPA1-206ENST00000573994 CSTF1Q05048 431 aaKnown RBP10.63□□□□□ -0.71
RPA1-206ENST00000573994 FAM160A1Q05DH4 1040 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 PPP3CAQ08209 521 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 MTAPQ13126 283 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 ZCWPW2Q504Y3 356 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 ARHGAP29Q52LW3 1261 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 TSSK4Q6SA08 328 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 VSTM1Q6UX27 236 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 DENND5BQ6ZUT9 1274 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 FAM35AQ86V20 835 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 MON1AQ86VX9 555 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 CELF5Q8N6W0 485 aaKnown RBP10.63□□□□□ -0.71
RPA1-206ENST00000573994 TAS1R2Q8TE23 839 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 NKD2Q969F2 451 aaPredicted RBP10.63□□□□□ -0.71
RPA1-206ENST00000573994 CLDN23Q96B33 292 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 MYRFLQ96LU7 910 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 CYP2S1Q96SQ9 504 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 MED10Q9BTT4 135 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 ELOVL4Q9GZR5 314 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 VRTNQ9H8Y1 702 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 APOBEC3GQ9HC16 384 aaKnown RBP10.63□□□□□ -0.71
RPA1-206ENST00000573994 RBM12Q9NTZ6 932 aaKnown RBP10.63□□□□□ -0.71
RPA1-206ENST00000573994 TDP1Q9NUW8 608 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 F5P12259 2224 aa10.63□□□□□ -0.71
RPA1-206ENST00000573994 GVINP1Q7Z2Y8 2422 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 TRAV19A0A0A6YYK7 116 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 PROB1E7EW31 1015 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 NCAM2O15394 837 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 ASS1P00966 412 aaKnown RBP10.62□□□□□ -0.71
RPA1-206ENST00000573994 KRT13P13646 458 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms