RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 TMEM60Q9H2L4 133 aa5.82□□□□□ -1.48
CDC27-215ENST00000573550 SYNPO2LQ9H987 977 aa5.82□□□□□ -1.48
CDC27-215ENST00000573550 ZMAT3Q9HA38 289 aaKnown RBP5.82□□□□□ -1.48
CDC27-215ENST00000573550 DMTF1Q9Y222 760 aa5.82□□□□□ -1.48
CDC27-215ENST00000573550 MED16Q9Y2X0 877 aa5.82□□□□□ -1.48
CDC27-215ENST00000573550 LRRC7Q96NW7 1537 aa5.82□□□□□ -1.48
CDC27-215ENST00000573550 CDK12Q9NYV4 1490 aaPredicted RBP5.82□□□□□ -1.48
CDC27-215ENST00000573550 A0A1W2PP64 1363 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 CPS1P31327 1500 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 ERC2O15083 957 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 YY2O15391 372 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 UNC5CO95185 931 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 PLA2G5P39877 138 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 NDUFV1P49821 464 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 RARSP54136 660 aaKnown RBP5.81□□□□□ -1.48
CDC27-215ENST00000573550 INHBEP58166 350 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 SWSAP1Q6NVH7 229 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 PCSK9Q8NBP7 692 aaKnown RBP5.81□□□□□ -1.48
CDC27-215ENST00000573550 FAM46DQ8NEK8 389 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 MYCBPAPQ8TBZ2 947 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 SLC9A6Q92581 669 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 OSBPL9Q96SU4 736 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 PNNQ9H307 717 aaKnown RBP5.81□□□□□ -1.48
CDC27-215ENST00000573550 ATP6V0A4Q9HBG4 840 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 FOXJ2Q9P0K8 574 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 HESX1Q9UBX0 185 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 CPA4Q9UI42 421 aa5.81□□□□□ -1.48
CDC27-215ENST00000573550 YTHDC2Q9H6S0 1430 aaKnown RBP5.81□□□□□ -1.48
CDC27-215ENST00000573550 AKAP12Q02952 1782 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 KIF16BQ96L93 1317 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 A0A0B4J269 797 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 A6NNZ2 444 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 FAM227AF5H4B4 570 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 SOAT2O75908 522 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 NPR1P16066 1061 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 FOLR3P41439 243 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 ARFIP2P53365 341 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 TUBB3Q13509 450 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 BECN1Q14457 450 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 ZNF169Q14929 603 aaPredicted RBP5.8□□□□□ -1.48
CDC27-215ENST00000573550 SMN1Q16637 294 aaKnown RBP5.8□□□□□ -1.48
CDC27-215ENST00000573550 PRR16Q569H4 304 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 TSHZ1Q6ZSZ6 1077 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 KIAA0319LQ8IZA0 1049 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 MYO1HQ8N1T3 1032 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 FAM109AQ8N4B1 249 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 P2RX7Q99572 595 aaKnown RBP5.8□□□□□ -1.48
CDC27-215ENST00000573550 C1orf112Q9NSG2 853 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 PIH1D1Q9NWS0 290 aaKnown RBP5.8□□□□□ -1.48
CDC27-215ENST00000573550 C11orf21Q9P2W6 132 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 PLEKHM1Q9Y4G2 1056 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.8□□□□□ -1.48
CDC27-215ENST00000573550 RAD54BQ9Y620 910 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 TECPR2O15040 1411 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 FAM135BQ49AJ0 1406 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 DIP2BQ9P265 1576 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 PIK3R4Q99570 1358 aa5.8□□□□□ -1.48
CDC27-215ENST00000573550 ITSN1Q15811 1721 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 USP19O94966 1318 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 C3P01024 1663 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 TOPAZ1Q8N9V7 1692 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 NRXN3Q9Y4C0 1643 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 MGST3O14880 152 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 DCLK1O15075 740 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 MPPED1O15442 326 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 SUV39H1O43463 412 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 PEX1O43933 1283 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 ITGALP20701 1170 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 GCLCP48506 637 aaPredicted RBP5.79□□□□□ -1.48
CDC27-215ENST00000573550 KCNJ5P48544 419 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 CLK3P49761 638 aaKnown RBP5.79□□□□□ -1.48
CDC27-215ENST00000573550 SIM1P81133 766 aaPredicted RBP5.79□□□□□ -1.48
CDC27-215ENST00000573550 GPSM2P81274 684 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 MRPS35P82673 323 aaKnown RBP5.79□□□□□ -1.48
CDC27-215ENST00000573550 HDAC1Q13547 482 aaPredicted RBP5.79□□□□□ -1.48
CDC27-215ENST00000573550 RBM20Q5T481 1227 aaKnown RBP5.79□□□□□ -1.48
CDC27-215ENST00000573550 CCDC146Q8IYE0 955 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 TCP11L2Q8N4U5 519 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 ACTRT2Q8TDY3 377 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 PDLIM2Q96JY6 352 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 SLC46A1Q96NT5 459 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 HEPHQ9BQS7 1158 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 SPATA5L1Q9BVQ7 753 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 TRIM54Q9BYV2 358 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 PRDM13Q9H4Q3 707 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 UPF2Q9HAU5 1272 aaKnown RBP5.79□□□□□ -1.48
CDC27-215ENST00000573550 CNNM1Q9NRU3 951 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 TERF2IPQ9NYB0 399 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 DDX20Q9UHI6 824 aaKnown RBP5.79□□□□□ -1.48
CDC27-215ENST00000573550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDC27-215ENST00000573550 NALCNQ8IZF0 1738 aa5.79□□□□□ -1.48
CDC27-215ENST00000573550 RIMS1Q86UR5 1692 aaKnown RBP5.79□□□□□ -1.48
CDC27-215ENST00000573550 CFAP65Q6ZU64 1925 aaKnown RBP5.78□□□□□ -1.48
CDC27-215ENST00000573550 WDR27A2RRH5 827 aa5.78□□□□□ -1.48
CDC27-215ENST00000573550 F5H697 171 aa5.78□□□□□ -1.48
CDC27-215ENST00000573550 KIAA0355O15063 1070 aa5.78□□□□□ -1.48
CDC27-215ENST00000573550 TRIAP1O43715 76 aa5.78□□□□□ -1.48
CDC27-215ENST00000573550 EIF5BO60841 1220 aaKnown RBP5.78□□□□□ -1.48
CDC27-215ENST00000573550 BCAR3O75815 825 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms