RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TRPM5Q9NZQ8 1165 aa13.52□□□□□ -0.25
NPLOC4-213ENST00000573519 ATP8B3O60423 1300 aa13.52□□□□□ -0.25
NPLOC4-213ENST00000573519 DMDP11532 3685 aa13.52□□□□□ -0.25
NPLOC4-213ENST00000573519 USP34Q70CQ2 3546 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 MAPK13O15264 365 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 LMNAP02545 664 aaKnown RBP13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 CHRNB1P11230 501 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 HDCP19113 662 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 ANP32AP39687 249 aaKnown RBP13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 GCLMP48507 274 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 RUNX3Q13761 415 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 ZNF268Q14587 947 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 PPP2R5DQ14738 602 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 MTF1Q14872 753 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 NFIL3Q16649 462 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 ZNF528Q3MIS6 628 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 C1orf220Q5T0J3 134 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 ACOT1Q86TX2 421 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 RIN3Q8TB24 985 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 ATRIPQ8WXE1 791 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 TAF4BQ92750 862 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 EEF2KMTQ96G04 330 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 CEP295NLQ96MC4 621 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 HINFPQ9BQA5 517 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 FAM83CQ9BQN1 747 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 SEMA4AQ9H3S1 761 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 CHMP5Q9NZZ3 219 aa13.51□□□□□ -0.25
NPLOC4-213ENST00000573519 PATJQ8NI35 1801 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 KINO60870 393 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 SMC2O95347 1197 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 ARSAP15289 507 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 PDE6CP51160 858 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 TAF10Q12962 218 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 DGKKQ5KSL6 1271 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 FAM35AQ86V20 835 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 CCDC150Q8NCX0 1101 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 SH3RF2Q8TEC5 729 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 SMARCE1Q969G3 411 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 SLITRK1Q96PX8 696 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 TSG101Q99816 390 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 HPS4Q9NQG7 708 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 PRMT8Q9NR22 394 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 TMEM30AQ9NV96 361 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 DUS2Q9NX74 493 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 HOOK1Q9UJC3 728 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 OBSL1O75147 1896 aa13.5□□□□□ -0.25
NPLOC4-213ENST00000573519 CETN3O15182 167 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 ASS1P00966 412 aaKnown RBP13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 EPB41P11171 864 aaKnown RBP13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 CCDC130P13994 396 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 TRIM21P19474 475 aaKnown RBP13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 PRCPP42785 496 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 ASPAP45381 313 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 PPP3CCP48454 512 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 IFNAR2P48551 515 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 CCR3P51677 355 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 NDST1P52848 882 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 PPP3CAQ08209 521 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 PDGFRLQ15198 375 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 ZNF77Q15935 545 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 EDRF1Q3B7T1 1238 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 ZCWPW2Q504Y3 356 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 ZNF658Q5TYW1 1059 aaPredicted RBP13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 Q6ZS52 159 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 NUP93Q8N1F7 819 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 CPA6Q8N4T0 437 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 TAS1R2Q8TE23 839 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 SMARCD1Q96GM5 515 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 GSDMAQ96QA5 445 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 IER2Q9BTL4 223 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 TTLL2Q9BWV7 592 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 DMAP1Q9NPF5 467 aaPredicted RBP13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 KRT82Q9NSB4 513 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 FAM49BQ9NUQ9 324 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 ZSCAN32Q9NX65 697 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 GCNT4Q9P109 453 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 HMGXB4Q9UGU5 601 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 PCDHGA2Q9Y5H1 932 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 PCDHA5Q9Y5H7 936 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 WNT6Q9Y6F9 365 aa13.49□□□□□ -0.25
NPLOC4-213ENST00000573519 ZNF840PA6NDX5 716 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 OTOL1A6NHN0 477 aaPredicted RBP13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 AP1G2O75843 785 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 RTN3O95197 1032 aaPredicted RBP13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 CD58P19256 250 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 YWHAQP27348 245 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 ADORA2BP29275 332 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 CXCL12P48061 93 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 AMPD2Q01433 879 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 SATB1Q01826 763 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 GRSF1Q12849 480 aaKnown RBP eCLIP13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 USP4Q13107 963 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 GAS6Q14393 721 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 WDR44Q5JSH3 913 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 TCERG1LQ5VWI1 586 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 KRT39Q6A163 491 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 ISM2Q6H9L7 571 aa13.48□□□□□ -0.25
NPLOC4-213ENST00000573519 UNC93AQ86WB7 457 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms