RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 TASP1Q9H6P5 420 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 SMYD3Q9H7B4 428 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 VRTNQ9H8Y1 702 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 IL21Q9HBE4 155 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 CBX8Q9HC52 389 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 CRTAC1Q9NQ79 661 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 UXTQ9UBK9 157 aaPredicted RBP9.68□□□□□ -0.86
NDE1-207ENST00000573203 SIT1Q9Y3P8 196 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 PCDHA5Q9Y5H7 936 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 GREB1Q4ZG55 1949 aa9.68□□□□□ -0.86
NDE1-207ENST00000573203 MYH10P35580 1976 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 KANSL1LA0AUZ9 987 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 SLC38A8A6NNN8 435 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 SMTNL1A8MU46 457 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 H0Y858 1186 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 CETN3O15182 167 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 NOL4O94818 638 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 F11P03951 625 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 TPM3P06753 285 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 DCNP07585 359 aaKnown RBP9.67□□□□□ -0.86
NDE1-207ENST00000573203 TRIM49P0CI25 452 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 TRIM49CP0CI26 452 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 EPB41P11171 864 aaKnown RBP9.67□□□□□ -0.86
NDE1-207ENST00000573203 PTPN1P18031 435 aaKnown RBP9.67□□□□□ -0.86
NDE1-207ENST00000573203 ANXA13P27216 316 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 PRCPP42785 496 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 RAP1GAPP47736 663 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 GCLMP48507 274 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 CDH8P55286 799 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 UBXN2BQ14CS0 331 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 SGSM1Q2NKQ1 1148 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 EDRF1Q3B7T1 1238 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 ZCWPW2Q504Y3 356 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 C1orf220Q5T0J3 134 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 VSTM1Q6UX27 236 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 TPRG1Q6ZUI0 275 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 SV2AQ7L0J3 742 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 CCDC105Q8IYK2 499 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 DTWD2Q8NBA8 298 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 PJA1Q8NG27 643 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 MYCBPAPQ8TBZ2 947 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 MRPS31Q92665 395 aaKnown RBP9.67□□□□□ -0.86
NDE1-207ENST00000573203 ATOH1Q92858 354 aaPredicted RBP9.67□□□□□ -0.86
NDE1-207ENST00000573203 DNASE1L2Q92874 299 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 ELMO3Q96BJ8 720 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 PCED1BQ96HM7 432 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 TSG101Q99816 390 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 MKNK1Q9BUB5 465 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 IMPG2Q9BZV3 1241 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 DPEP3Q9H4B8 488 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 MMRN2Q9H8L6 949 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 HEBP1Q9NRV9 189 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 ZMYM5Q9UJ78 669 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 COL4A3Q01955 1670 aa9.67□□□□□ -0.86
NDE1-207ENST00000573203 ANAPC1Q9H1A4 1944 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 NCANO14594 1321 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 TRIM66O15016 1216 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 HLA-DRAP01903 254 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 CD72P21854 359 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 DDX6P26196 483 aaKnown RBP eCLIP9.66□□□□□ -0.86
NDE1-207ENST00000573203 WEE1P30291 646 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 AVPR1AP37288 418 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 ENPEPQ07075 957 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 STIM1Q13586 685 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 COBLL1Q53SF7 1204 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 TXNDC8Q6A555 127 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 ISM2Q6H9L7 571 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 SPOPLQ6IQ16 392 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 ZNF852Q6ZMS4 543 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.66□□□□□ -0.86
NDE1-207ENST00000573203 TMEM150AQ86TG1 271 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 CMTM8Q8IZV2 173 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 MAB21L3Q8N8X9 362 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 MLKLQ8NB16 471 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 B3GALNT2Q8NCR0 500 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 CCDC150Q8NCX0 1101 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 CSGALNACT1Q8TDX6 532 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 TAF4BQ92750 862 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 RSPRY1Q96DX4 576 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 EEF2KMTQ96G04 330 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 TRMT2BQ96GJ1 504 aaKnown RBP9.66□□□□□ -0.86
NDE1-207ENST00000573203 TNIP3Q96KP6 325 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 SPATA17Q96L03 361 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 MYRFLQ96LU7 910 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 CEP295NLQ96MC4 621 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 DDX23Q9BUQ8 820 aaKnown RBP9.66□□□□□ -0.86
NDE1-207ENST00000573203 SLC46A2Q9BY10 475 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 ELOVL4Q9GZR5 314 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 TMEM8AQ9HCN3 771 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 TRPC7Q9HCX4 862 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 LTB4R2Q9NPC1 389 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.862e-6■■■■■ 90.7
NDE1-207ENST00000573203 OBP2AQ9NY56 170 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 MRPS17Q9Y2R5 130 aaKnown RBP9.66□□□□□ -0.86
NDE1-207ENST00000573203 NME7Q9Y5B8 376 aa9.66□□□□□ -0.86
NDE1-207ENST00000573203 COL4A2P08572 1712 aa9.65□□□□□ -0.86
NDE1-207ENST00000573203 ATP8B3O60423 1300 aa9.65□□□□□ -0.86
NDE1-207ENST00000573203 FAM170BA6NMN3 283 aa9.65□□□□□ -0.86
NDE1-207ENST00000573203 F8VP50 259 aa9.65□□□□□ -0.86
NDE1-207ENST00000573203 GOLGA6L19H0YKK7 550 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms