RNA–Protein interactions for RNA: ENST00000573123.1

CXCL16-202, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS ALT2 TSL 2

Gene CXCL16, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-202ENST00000573123 TRPC3Q13507 836 aa18.91■□□□□ 0.62
CXCL16-202ENST00000573123 MDH1BQ5I0G3 518 aa18.91■□□□□ 0.62
CXCL16-202ENST00000573123 NELFCDQ8IXH7 590 aa18.91■□□□□ 0.62
CXCL16-202ENST00000573123 OR6B3Q8NGW1 331 aa18.91■□□□□ 0.62
CXCL16-202ENST00000573123 CCDC127Q96BQ5 260 aa18.91■□□□□ 0.62
CXCL16-202ENST00000573123 PCED1BQ96HM7 432 aa18.91■□□□□ 0.62
CXCL16-202ENST00000573123 C8orf48Q96LL4 319 aa18.91■□□□□ 0.62
CXCL16-202ENST00000573123 TTLL2Q9BWV7 592 aa18.91■□□□□ 0.62
CXCL16-202ENST00000573123 DENND4CQ5VZ89 1909 aa18.91■□□□□ 0.62
CXCL16-202ENST00000573123 ZNF638Q14966 1978 aaKnown RBP18.9■□□□□ 0.62
CXCL16-202ENST00000573123 CLIC2O15247 247 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 POLR2DO15514 142 aaKnown RBP18.9■□□□□ 0.62
CXCL16-202ENST00000573123 TGFB1I1O43294 461 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 EPN2O95208 641 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 STAU1O95793 577 aaKnown RBP18.9■□□□□ 0.62
CXCL16-202ENST00000573123 PXNP49023 591 aaPredicted RBP18.9■□□□□ 0.62
CXCL16-202ENST00000573123 BMT2Q1RMZ1 405 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 WDR72Q3MJ13 1102 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 KIAA1958Q8N8K9 716 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 RPLP0P6Q8NHW5 317 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 GOLGA5Q8TBA6 731 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 SCFD1Q8WVM8 642 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 MRPL45Q9BRJ2 306 aaKnown RBP18.9■□□□□ 0.62
CXCL16-202ENST00000573123 ELOVL4Q9GZR5 314 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 FBRSL1Q9HCM7 1045 aaKnown RBP18.9■□□□□ 0.62
CXCL16-202ENST00000573123 OBSL1O75147 1896 aa18.9■□□□□ 0.62
CXCL16-202ENST00000573123 F8VP50 259 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 AXIN1O15169 862 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 CLSTN1O94985 981 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
CXCL16-202ENST00000573123 ATICP31939 592 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 NOP14P78316 857 aaKnown RBP18.89■□□□□ 0.61
CXCL16-202ENST00000573123 EHHADHQ08426 723 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 PSMD2Q13200 908 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 AASDHQ4L235 1098 aaPredicted RBP18.89■□□□□ 0.61
CXCL16-202ENST00000573123 SYT13Q7L8C5 426 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 C12orf56Q8IXR9 622 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 C12orf50Q8NA57 414 aaPredicted RBP18.89■□□□□ 0.61
CXCL16-202ENST00000573123 DDX1Q92499 740 aaKnown RBP18.89■□□□□ 0.61
CXCL16-202ENST00000573123 SNX21Q969T3 373 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 SYAP1Q96A49 352 aaPredicted RBP18.89■□□□□ 0.61
CXCL16-202ENST00000573123 HHIPQ96QV1 700 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 PCDHGA5Q9Y5G8 931 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 ATP8B3O60423 1300 aa18.89■□□□□ 0.61
CXCL16-202ENST00000573123 PVALEFA0A1B0GWK0 134 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 A8MXQ7 604 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 LEFTY2O00292 366 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 EXOC3O60645 756 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 PHACTR2O75167 634 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 APBB3O95704 486 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 CST3P01034 146 aaPredicted RBP18.88■□□□□ 0.61
CXCL16-202ENST00000573123 PTPN1P18031 435 aaKnown RBP18.88■□□□□ 0.61
CXCL16-202ENST00000573123 HOXC13P31276 330 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 ME1P48163 572 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 USP46P62068 366 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 FOXD4L5Q5VV16 416 aaPredicted RBP18.88■□□□□ 0.61
CXCL16-202ENST00000573123 TDRD10Q5VZ19 366 aaKnown RBP18.88■□□□□ 0.61
CXCL16-202ENST00000573123 NAIF1Q69YI7 327 aaPredicted RBP18.88■□□□□ 0.61
CXCL16-202ENST00000573123 ATL3Q6DD88 541 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 HSCBQ8IWL3 235 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 FOXD4L4Q8WXT5 416 aaPredicted RBP18.88■□□□□ 0.61
CXCL16-202ENST00000573123 SLITRK1Q96PX8 696 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 BLZF1Q9H2G9 400 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 ARRDC1-AS1Q9H2J1 176 aa18.88■□□□□ 0.61
CXCL16-202ENST00000573123 ZNF840PA6NDX5 716 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 ACACBO00763 2458 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 SLC9A3R1O14745 358 aaPredicted RBP18.87■□□□□ 0.61
CXCL16-202ENST00000573123 ZSCAN22P10073 491 aaPredicted RBP18.87■□□□□ 0.61
CXCL16-202ENST00000573123 RAP1GAPP47736 663 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 AP3M2P53677 418 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 SLC7A9P82251 487 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 BIRC3Q13489 604 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 DMC1Q14565 340 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 ELF2Q15723 593 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 IL31Q6EBC2 164 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 KBTBD6Q86V97 674 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 DDX42Q86XP3 938 aaKnown RBP eCLIP18.87■□□□□ 0.61
CXCL16-202ENST00000573123 CEP57L1Q8IYX8 460 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 B3GALNT2Q8NCR0 500 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 SLC39A2Q9NP94 309 aa18.87■□□□□ 0.61
CXCL16-202ENST00000573123 NXF1Q9UBU9 619 aaKnown RBP18.87■□□□□ 0.61
CXCL16-202ENST00000573123 RTN3O95197 1032 aaPredicted RBP18.86■□□□□ 0.61
CXCL16-202ENST00000573123 F13A1P00488 732 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 ABL1P00519 1130 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 ZNF806P0C7X5 589 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 LIMK1P53667 647 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 MYL6P60660 151 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 KNOP1Q1ED39 458 aaKnown RBP18.86■□□□□ 0.61
CXCL16-202ENST00000573123 FOXD4L6Q3SYB3 417 aaPredicted RBP18.86■□□□□ 0.61
CXCL16-202ENST00000573123 PPM1JQ5JR12 505 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 RESP18Q5W5W9 173 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 FOXD4L3Q6VB84 417 aaPredicted RBP18.86■□□□□ 0.61
CXCL16-202ENST00000573123 PDZD8Q8NEN9 1154 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 TSTD1Q8NFU3 115 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 ZC3H10Q96K80 434 aaKnown RBP18.86■□□□□ 0.61
CXCL16-202ENST00000573123 ZNF518BQ9C0D4 1074 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 LINC00597Q9H2U6 94 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 EBF1Q9UH73 591 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 CFAP45Q9UL16 551 aa18.86■□□□□ 0.61
CXCL16-202ENST00000573123 PCDHA7Q9UN72 937 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms