RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 BCCIPQ9P287 314 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHMP6-203ENST00000572525 KIAA1024Q9UPX6 916 aa10.91□□□□□ -0.66
CHMP6-203ENST00000572525 DNM3Q9UQ16 869 aa10.91□□□□□ -0.66
CHMP6-203ENST00000572525 C2CD2Q9Y426 696 aa10.91□□□□□ -0.66
CHMP6-203ENST00000572525 PIEZO2Q9H5I5 2752 aa10.91□□□□□ -0.66
CHMP6-203ENST00000572525 SLC16A4O15374 487 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 EIF5BO60841 1220 aaKnown RBP10.9□□□□□ -0.66
CHMP6-203ENST00000572525 ADAM23O75077 832 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 KAT7O95251 611 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 KLF8O95600 359 aaPredicted RBP10.9□□□□□ -0.66
CHMP6-203ENST00000572525 CYP17A1P05093 508 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 PLS3P13797 630 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 PLA2G2AP14555 144 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 GRIA2P42262 883 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 TAF6P49848 677 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 SEC13P55735 322 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 TSPY1Q01534 308 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 SPAG1Q07617 926 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 KCNB1Q14721 858 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 CFAP221Q4G0U5 840 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 PREPLQ4J6C6 727 aaPredicted RBP10.9□□□□□ -0.66
CHMP6-203ENST00000572525 RINT1Q6NUQ1 792 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 FRMD1Q8N878 549 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 IGSF22Q8N9C0 903 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 ZNF419Q96HQ0 510 aaPredicted RBP10.9□□□□□ -0.66
CHMP6-203ENST00000572525 FUBP3Q96I24 572 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHMP6-203ENST00000572525 SLC22A12Q96S37 553 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 RAB34Q9BZG1 259 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 UPF2Q9HAU5 1272 aaKnown RBP10.9□□□□□ -0.66
CHMP6-203ENST00000572525 KCND2Q9NZV8 630 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 PCOLCE2Q9UKZ9 415 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 PCDHGB2Q9Y5G2 931 aa10.9□□□□□ -0.66
CHMP6-203ENST00000572525 IGHV1OR15-9A0A0B4J2B8 117 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 TCRBV21S2A2A0A5A6 115 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 CYB561D2O14569 222 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 NFICP08651 508 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 GNSP15586 552 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 HDCP19113 662 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 ABCD1P33897 745 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 TNFSF9P41273 254 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 ABCG1P45844 678 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 GUCY2FP51841 1108 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 NCKAP1LP55160 1127 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 SLC7A9P82251 487 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 TMEM132DQ14C87 1099 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 JADE1Q6IE81 842 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 DBX2Q6ZNG2 339 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 SLCO6A1Q86UG4 719 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 SLC41A1Q8IVJ1 513 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 ADGRG2Q8IZP9 1017 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 HMGB4Q8WW32 186 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 FOXJ1Q92949 421 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 CAMK1GQ96NX5 476 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 CDC6Q99741 560 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 ACBD6Q9BR61 282 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 RUSC1Q9BVN2 902 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 LINC00597Q9H2U6 94 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 PDRG1Q9NUG6 133 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 LRWD1Q9UFC0 647 aa10.89□□□□□ -0.67
CHMP6-203ENST00000572525 CPSF3Q9UKF6 684 aaKnown RBP10.89□□□□□ -0.67
CHMP6-203ENST00000572525 MAGED2Q9UNF1 606 aaPredicted RBP10.89□□□□□ -0.67
CHMP6-203ENST00000572525 A0A0B4J269 797 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 PRPF40AO75400 957 aaKnown RBP10.88□□□□□ -0.67
CHMP6-203ENST00000572525 OLFM2O95897 454 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 ADH1CP00326 375 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 TIE1P35590 1138 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 PNPLA4P41247 253 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 MAGEA11P43364 429 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 PPP3CCP48454 512 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 RESTQ13127 1097 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 TRIM29Q14134 588 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 DHCR24Q15392 516 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 SAFBQ15424 915 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHMP6-203ENST00000572525 PLEKHG6Q3KR16 790 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 SV2CQ496J9 727 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 SYCP2LQ5T4T6 812 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 WSCD1Q658N2 575 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 NUDT18Q6ZVK8 323 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 TTC30AQ86WT1 665 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 NT5DC4Q86YG4 428 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 TMEM130Q8N3G9 435 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 PHTF2Q8N3S3 785 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 PDCD7Q8N8D1 485 aaKnown RBP10.88□□□□□ -0.67
CHMP6-203ENST00000572525 ARL14EPQ8N8R7 260 aaPredicted RBP10.88□□□□□ -0.67
CHMP6-203ENST00000572525 PNPLA1Q8N8W4 532 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 SNX29Q8TEQ0 813 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 DNASE2BQ8WZ79 361 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 OTUB2Q96DC9 234 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 HSPA12BQ96MM6 686 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 ZNF560Q96MR9 790 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 CYP2S1Q96SQ9 504 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 PKMYT1Q99640 499 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 PYM1Q9BRP8 204 aaKnown RBP10.88□□□□□ -0.67
CHMP6-203ENST00000572525 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
CHMP6-203ENST00000572525 TRPC7Q9HCX4 862 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 FSCN3Q9NQT6 498 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 ARHGEF4Q9NR80 690 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 TOR4AQ9NXH8 423 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms