RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 WNT6Q9Y6F9 365 aa4.35□□□□□ -1.71
CDC27-213ENST00000571643 PNPLA6Q8IY17 1366 aa4.35□□□□□ -1.71
CDC27-213ENST00000571643 ATP7BP35670 1465 aa4.35□□□□□ -1.71
CDC27-213ENST00000571643 USP32Q8NFA0 1604 aa4.35□□□□□ -1.71
CDC27-213ENST00000571643 TOPAZ1Q8N9V7 1692 aa4.35□□□□□ -1.71
CDC27-213ENST00000571643 RBMXL2O75526 392 aaKnown RBP4.34□□□□□ -1.71
CDC27-213ENST00000571643 C1QL1O75973 258 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 MATN4O95460 622 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 TTLL1O95922 423 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 CHRM2P08172 466 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 PRDX5P30044 214 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 IL12RB1P42701 662 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 ZNF135P52742 658 aaPredicted RBP4.34□□□□□ -1.71
CDC27-213ENST00000571643 MC2RQ01718 297 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 DSC2Q02487 901 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 TCF15Q12870 199 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 SNAPC2Q13487 334 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 KIF22Q14807 665 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 NGDNQ8NEJ9 315 aaKnown RBP4.34□□□□□ -1.71
CDC27-213ENST00000571643 PNISRQ8TF01 805 aaKnown RBP4.34□□□□□ -1.71
CDC27-213ENST00000571643 PMM1Q92871 262 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 NUP88Q99567 741 aaPredicted RBP4.34□□□□□ -1.71
CDC27-213ENST00000571643 SMAD5Q99717 465 aaKnown RBP4.34□□□□□ -1.71
CDC27-213ENST00000571643 ASPSCR1Q9BZE9 553 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 CPNE5Q9HCH3 593 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 PCDH12Q9NPG4 1184 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 HOMER2Q9NSB8 354 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 ASB6Q9NWX5 421 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 ETAA1Q9NY74 926 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 EHD3Q9NZN3 535 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 SLC45A2Q9UMX9 530 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 FRMD4BQ9Y2L6 1034 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 NR2E3Q9Y5X4 410 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 TNKSO95271 1327 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 TTC21AQ8NDW8 1320 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 DISP3Q9P2K9 1392 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 TNS3Q68CZ2 1445 aa4.34□□□□□ -1.71
CDC27-213ENST00000571643 MARF1Q9Y4F3 1742 aaKnown RBP4.34□□□□□ -1.71
CDC27-213ENST00000571643 TRPM3Q9HCF6 1732 aaPredicted RBP4.33□□□□□ -1.72
CDC27-213ENST00000571643 ALS2Q96Q42 1657 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 CDK12Q9NYV4 1490 aaPredicted RBP4.33□□□□□ -1.72
CDC27-213ENST00000571643 ACEP12821 1306 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 WDR27A2RRH5 827 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 ADM5C9JUS6 153 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 E9PLN8 166 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 F5H697 171 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 ZRANB2O95218 330 aaKnown RBP eCLIP4.33□□□□□ -1.72
CDC27-213ENST00000571643 FTLP02792 175 aaPredicted RBP4.33□□□□□ -1.72
CDC27-213ENST00000571643 HK3P52790 923 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 PSMC1P62191 440 aaKnown RBP4.33□□□□□ -1.72
CDC27-213ENST00000571643 TMF1P82094 1093 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 NOGQ13253 232 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 HABP2Q14520 560 aaPredicted RBP4.33□□□□□ -1.72
CDC27-213ENST00000571643 TSTD2Q5T7W7 516 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 SUMO4Q6EEV6 95 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 SFRP4Q6FHJ7 346 aaPredicted RBP4.33□□□□□ -1.72
CDC27-213ENST00000571643 TSHZ1Q6ZSZ6 1077 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 USP45Q70EL2 814 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 ZBTB46Q86UZ6 589 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 FAM90A1Q86YD7 464 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 PSD4Q8NDX1 1056 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 BRIX1Q8TDN6 353 aaKnown RBP4.33□□□□□ -1.72
CDC27-213ENST00000571643 HASPINQ8TF76 798 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 ATRIPQ8WXE1 791 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 CHMP4CQ96CF2 233 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 TESK2Q96S53 571 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 NELL2Q99435 816 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 VKORC1Q9BQB6 163 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 TPSD1Q9BZJ3 242 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 TINAGL1Q9GZM7 467 aaPredicted RBP4.33□□□□□ -1.72
CDC27-213ENST00000571643 MAF1Q9H063 256 aa4.33□□□□□ -1.72
CDC27-213ENST00000571643 GEMIN8Q9NWZ8 242 aaKnown RBP4.33□□□□□ -1.72
CDC27-213ENST00000571643 NWD2Q9ULI1 1742 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 CPSF1Q10570 1443 aaKnown RBP4.32□□□□□ -1.72
CDC27-213ENST00000571643 PPIP5K1Q6PFW1 1433 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 USP47Q96K76 1375 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 INO80B-WBP1J3KQ70 363 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 PDCP20941 246 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 AKAP5P24588 427 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 CD6P30203 668 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 ODF1Q14990 250 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 C4orf46Q504U0 113 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 MEX3CQ5U5Q3 659 aaKnown RBP4.32□□□□□ -1.72
CDC27-213ENST00000571643 WDR78Q5VTH9 848 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 ZNF788Q6ZQV5 615 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 HEATR3Q7Z4Q2 680 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 ZNF804AQ7Z570 1209 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 SRRM1Q8IYB3 904 aaKnown RBP4.32□□□□□ -1.72
CDC27-213ENST00000571643 CCDC146Q8IYE0 955 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 CPA6Q8N4T0 437 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 NSUN7Q8NE18 718 aaKnown RBP4.32□□□□□ -1.72
CDC27-213ENST00000571643 MTFMTQ96DP5 389 aaKnown RBP4.32□□□□□ -1.72
CDC27-213ENST00000571643 HAPLN3Q96S86 360 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 INO80BQ9C086 356 aaPredicted RBP4.32□□□□□ -1.72
CDC27-213ENST00000571643 SLAMF7Q9NQ25 335 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 LMBRD1Q9NUN5 540 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 VSX1Q9NZR4 365 aaPredicted RBP4.32□□□□□ -1.72
CDC27-213ENST00000571643 ABCF2Q9UG63 623 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 RAD54BQ9Y620 910 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms