RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 GLI1P08151 1106 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 BDNFP23560 247 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 OR1D2P34982 312 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 GRIK1P39086 918 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 PTP4A2Q12974 167 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
CDRT1-206ENST00000571263 PMF1Q6P1K2 205 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 PRSS55Q6UWB4 352 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-206ENST00000571263 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 ARCQ7LC44 396 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 TMC7Q7Z402 723 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 PIGZQ86VD9 579 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 TDHQ8IZJ6 230 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 SLC35G2Q8TBE7 412 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 FEZF2Q8TBJ5 459 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 CPXM1Q96SM3 734 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 SELENOOQ9BVL4 669 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 VN1R3Q9BXE9 311 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 PACSIN1Q9BY11 444 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 CNGB3Q9NQW8 809 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 KRT82Q9NSB4 513 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 ASNSD1Q9NWL6 643 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 DPP7Q9UHL4 492 aa12.57□□□□□ -0.4
CDRT1-206ENST00000571263 A0A1W2PPC1 479 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 LCHNA4D1U4 455 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 MTMR11A4FU01 709 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 RCCD1A6NED2 376 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 USP27XA6NNY8 438 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 MYO1FO00160 1098 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 CLDN5O00501 218 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 ADH1AP07327 375 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 CA3P07451 260 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 KRT3P12035 628 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 ATF2P15336 505 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 RRM1P23921 792 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 ELF1P32519 619 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-206ENST00000571263 RABGGTBP53611 331 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 MAP3K7CLP57077 242 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 ETF1P62495 437 aaKnown RBP12.56□□□□□ -0.4
CDRT1-206ENST00000571263 SLC6A3Q01959 620 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 ACAP1Q15027 740 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 PTPN20Q4JDL3 420 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 RAB41Q5JT25 222 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 DNAJC24Q6P3W2 148 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 DCUN1D2Q6PH85 259 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 NYAP1Q6ZVC0 841 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 SIX6OS1Q8N1H7 587 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 ZNF564Q8TBZ8 553 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-206ENST00000571263 SPPL3Q8TCT6 385 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 FNIP1Q8TF40 1166 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 IRGQQ8WZA9 623 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 GOLGA1Q92805 767 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 MCRS1Q96EZ8 462 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 SPATA17Q96L03 361 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 B3GALT6Q96L58 329 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 TMEM209Q96SK2 561 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 SMOQ99835 787 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 CLSTN3Q9BQT9 956 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 NUP85Q9BW27 656 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 FBXO44Q9H4M3 255 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 SLC28A3Q9HAS3 691 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 TLR9Q9NR96 1032 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 TMLHEQ9NVH6 421 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 ABI2Q9NYB9 513 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-206ENST00000571263 IP6K2Q9UHH9 426 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 PCDHGC5Q9Y5F6 944 aa12.56□□□□□ -0.4
CDRT1-206ENST00000571263 DNAH12Q6ZR08 3092 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 MACROD2A1Z1Q3 448 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 E5RJQ4 531 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 H3BNC9 293 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 C2CD2LO14523 706 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
CDRT1-206ENST00000571263 HAPLN1P10915 354 aaPredicted RBP12.55□□□□□ -0.4
CDRT1-206ENST00000571263 SLC1A1P43005 524 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 ARPP19P56211 112 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 GNG11P61952 73 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 SMAD3P84022 425 aaKnown RBP12.55□□□□□ -0.4
CDRT1-206ENST00000571263 ROR1Q01973 937 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 PLD1Q13393 1074 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 MAMLD1Q13495 774 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 OR6B2Q6IFH4 312 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 ELMSAN1Q6PJG2 1045 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 BEND5Q7L4P6 421 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 XYLT1Q86Y38 959 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 NUP93Q8N1F7 819 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 ARHGAP18Q8N392 663 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 MRPL43Q8N983 215 aaKnown RBP12.55□□□□□ -0.4
CDRT1-206ENST00000571263 POF1BQ8WVV4 589 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 LPIN3Q9BQK8 851 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 ENTPD7Q9NQZ7 604 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 RRN3Q9NYV6 651 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 CYTH4Q9UIA0 394 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 JRKLQ9Y4A0 524 aa12.55□□□□□ -0.4
CDRT1-206ENST00000571263 TCRBV5S1A1TA0A578 114 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 WDR27A2RRH5 827 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 TMEM191CA6NGB0 347 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 GRXCR1A8MXD5 290 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 ERBB2P04626 1255 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 OR4Q2P0C623 313 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms