RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PDE1AP54750 535 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 PSMC5P62195 406 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 BFSP1Q12934 665 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 TFDP1Q14186 410 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 EMC2Q15006 297 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 EML3Q32P44 896 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 ZSCAN23Q3MJ62 389 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 KCNT1Q5JUK3 1230 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 EOGTQ5NDL2 527 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 PRAMEF14Q5SWL7 426 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 ZNF280DQ6N043 979 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 LAYNQ6UX15 382 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 TMTC3Q6ZXV5 915 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 EXOC8Q8IYI6 725 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 TTC9BQ8N6N2 239 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 DCBLD1Q8N8Z6 715 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 TATDN2Q93075 761 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 PSMG2Q969U7 264 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 CNDP2Q96KP4 475 aaKnown RBP7.54□□□□□ -1.2
CHD3-213ENST00000571249 UROC1Q96N76 676 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 SEMA3CQ99985 751 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 GLT8D2Q9H1C3 349 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 TMPRSS4Q9NRS4 437 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 TDP1Q9NUW8 608 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 ASB3Q9Y575 518 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 H0Y8X5 98 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 MARCH6O60337 910 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 AGFG2O95081 481 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 LDOC1O95751 146 aaPredicted RBP7.53□□□□□ -1.2
CHD3-213ENST00000571249 C1SP09871 688 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 CDC25CP30307 473 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 GABREP78334 506 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 INSM1Q01101 510 aaPredicted RBP7.53□□□□□ -1.2
CHD3-213ENST00000571249 GUCA2AQ02747 115 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 MXD4Q14582 209 aaPredicted RBP7.53□□□□□ -1.2
CHD3-213ENST00000571249 MTF1Q14872 753 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 TXNDC8Q6A555 127 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 TMEM150AQ86TG1 271 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 PACS2Q86VP3 889 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 NOSTRINQ8IVI9 506 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 ATAD1Q8NBU5 361 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 ENGASEQ8NFI3 743 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 NCOA7Q8NI08 942 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 C1orf216Q8TAB5 229 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 ASAP3Q8TDY4 903 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 OSCP1Q8WVF1 389 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 FOXJ1Q92949 421 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 PPP1R10Q96QC0 940 aaKnown RBP7.53□□□□□ -1.2
CHD3-213ENST00000571249 GCNAQ96QF7 691 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 SLC25A18Q9H1K4 315 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 ASCL3Q9NQ33 180 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 DIAPH3Q9NSV4 1193 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 EIF2B4Q9UI10 523 aaKnown RBP7.53□□□□□ -1.2
CHD3-213ENST00000571249 GDAQ9Y2T3 454 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 TAF6LQ9Y6J9 622 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 ATRQ13535 2644 aa7.53□□□□□ -1.2
CHD3-213ENST00000571249 ARID2Q68CP9 1835 aa7.52□□□□□ -1.2
CHD3-213ENST00000571249 ZFC3H1O60293 1989 aaKnown RBP7.52□□□□□ -1.21
CHD3-213ENST00000571249 TMEM131Q92545 1883 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 A0A1W2PQF6 199 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 CCDC69A6NI79 296 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 MEI4A8MW99 385 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 BTBD18B2RXH4 712 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 E7EWF7 191 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 PODXLO00592 558 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 PCDHGA12O60330 932 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 PPFIA2O75334 1257 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 PSMD10O75832 226 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 CYP21A2P08686 494 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 PRF1P14222 555 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 HOXB4P17483 251 aaPredicted RBP7.52□□□□□ -1.21
CHD3-213ENST00000571249 ANP32AP39687 249 aaKnown RBP7.52□□□□□ -1.21
CHD3-213ENST00000571249 IFNAR2P48551 515 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 POU5F1BQ06416 359 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 SOX4Q06945 474 aaPredicted RBP7.52□□□□□ -1.21
CHD3-213ENST00000571249 SRSF6Q13247 344 aaKnown RBP7.52□□□□□ -1.21
CHD3-213ENST00000571249 CAPSQ13938 189 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 CLCA4Q14CN2 919 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 DCAF12L1Q5VU92 463 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 ITIH5Q86UX2 942 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 CHD1LQ86WJ1 897 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 APPL2Q8NEU8 664 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 BEST2Q8NFU1 509 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 SPATA20Q8TB22 786 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 ATP2A3Q93084 1043 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 TOE1Q96GM8 510 aaKnown RBP7.52□□□□□ -1.21
CHD3-213ENST00000571249 IPO9Q96P70 1041 aaKnown RBP7.52□□□□□ -1.21
CHD3-213ENST00000571249 MTRQ99707 1265 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 GPR174Q9BXC1 333 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 KIF9Q9HAQ2 790 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 BARHL2Q9NY43 387 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 HCN2Q9UL51 889 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 PPME1Q9Y570 386 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 NUB1Q9Y5A7 615 aa7.52□□□□□ -1.21
CHD3-213ENST00000571249 V9GY48 417 aaPredicted RBP7.52□□□□□ -1.21
CHD3-213ENST00000571249 FN1P02751 2386 aaKnown RBP7.52□□□□□ -1.21
CHD3-213ENST00000571249 EDIL3O43854 480 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 SEMA7AO75326 666 aa7.51□□□□□ -1.21
CHD3-213ENST00000571249 DXOO77932 396 aaKnown RBP7.51□□□□□ -1.21
CHD3-213ENST00000571249 KAT7O95251 611 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms