RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CCZ1P86791 482 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 FMO1Q01740 532 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ROR1Q01973 937 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 GFPT1Q06210 699 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 VEPH1Q14D04 833 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CNGA2Q16280 664 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 TAF12Q16514 161 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLC18A3Q16572 532 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CLEC16AQ2KHT3 1053 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 MGAT5BQ3V5L5 792 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 HS1BP3Q53T59 392 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CCDC122Q5T0U0 273 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 PPP1R26Q5T8A7 1209 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 LIN9Q5TKA1 542 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 NAA35Q5VZE5 725 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ARHGAP17Q68EM7 881 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLC8B1Q6J4K2 584 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 PDE12Q6L8Q7 609 aaKnown RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ALKBH5Q6P6C2 394 aaKnown RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 WDR59Q6PJI9 974 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 LCLAT1Q6UWP7 414 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF571Q7Z3V5 609 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 IRF2BP2Q7Z5L9 587 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 SCN4BQ8IWT1 228 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 RNF168Q8IYW5 571 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 SIX6OS1Q8N1H7 587 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CRYBG2Q8N1P7 616 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 C12orf29Q8N999 325 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 LNX1Q8TBB1 728 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 SPPL2BQ8TCT7 592 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 GDPD5Q8WTR4 605 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 POF1BQ8WVV4 589 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 AUTS2Q8WXX7 1259 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CTNNBL1Q8WYA6 563 aaPredicted RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 TFAP2BQ92481 460 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 SECISBP2LQ93073 1101 aaKnown RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF653Q96CK0 615 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 PCED1BQ96HM7 432 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 PGLYRP2Q96PD5 576 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CHP1Q99653 195 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 HNRNPABQ99729 332 aaKnown RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 VN1R3Q9BXE9 311 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 TSGA10Q9BZW7 698 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF518BQ9C0D4 1074 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 LMAN2LQ9H0V9 348 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CERS4Q9HA82 394 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ABCB6Q9NP58 842 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CRTAC1Q9NQ79 661 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CHST7Q9NS84 486 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 FKBPLQ9UIM3 349 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 GTF3C4Q9UKN8 822 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 STRIP2Q9ULQ0 834 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 CITO14578 2027 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 ANK1P16157 1881 aa6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 PDCD11Q14690 1871 aaKnown RBP6.96□□□□□ -1.3
CTDNEP1-204ENST00000570484 TSC2P49815 1807 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 TTC3P53804 2025 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 TMEM265A0A087WTH1 108 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 A0A087X0T9 212 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 FAM170AA1A519 330 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 MYBPHLA2RUH7 354 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 MTMR11A4FU01 709 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ANKRD62A6NC57 917 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 EIF3CLB5ME19 914 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 XPO1O14980 1071 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ATP2C2O75185 946 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ARHGEF15O94989 841 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 CXCL14O95715 111 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 CALCAP01258 141 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 FAM228BP0C875 321 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 SRGAP2BP0DMP2 458 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 MYBL1P10243 752 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ABCB4P21439 1286 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 BDNFP23560 247 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 MSNP26038 577 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 KLRC2P26717 231 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ACADSBP45954 432 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 RPIAP49247 311 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 MAP3K7CLP57077 242 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 RPL10AP62906 217 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 NOMO3P69849 1222 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 CENPCQ03188 943 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ADCY1Q08828 1119 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 GPR17Q13304 367 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 PDCLQ13371 301 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 PLD1Q13393 1074 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 CCDC142Q17RM4 750 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 CFAP221Q4G0U5 840 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ARHGAP29Q52LW3 1261 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 C10orf76Q5T2E6 689 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF697Q5TEC3 545 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 TPGS2Q68CL5 300 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 DENND1BQ6P3S1 775 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 VSTM1Q6UX27 236 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 RAD9BQ6WBX8 426 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 CCDC149Q6ZUS6 474 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 TAS1R1Q7RTX1 841 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ERICH1Q86X53 443 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 TMEM139Q8IV31 216 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms