RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CAMK2BQ13554 666 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 ZNF174Q15697 407 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 FILIP1Q7Z7B0 1213 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 C12orf40Q86WS4 652 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 ADGRG2Q8IZP9 1017 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 ZNF843Q8N446 348 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 TRIML1Q8N9V2 468 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 PIP4K2CQ8TBX8 421 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 SPATA18Q8TC71 538 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 SPIRE2Q8WWL2 714 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 HSPA12BQ96MM6 686 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 TM6SF1Q9BZW5 370 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 RPF1Q9H9Y2 349 aaKnown RBP11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 CALCOCO1Q9P1Z2 691 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 MYH10P35580 1976 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 KNL1Q8NG31 2342 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 LEFTY2O00292 366 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 DKK1O94907 266 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 TNFRSF4P43489 277 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 RPL10AP62906 217 aaKnown RBP11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 GRIK2Q13002 908 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 KCNB1Q14721 858 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 DHCR24Q15392 516 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 SETD7Q8WTS6 366 aaKnown RBP11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 ZNF419Q96HQ0 510 aaPredicted RBP11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 PNMA5Q96PV4 448 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 ARHGEF4Q9NR80 690 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 LRWD1Q9UFC0 647 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 DNM3Q9UQ16 869 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 MYLKQ15746 1914 aa11.23□□□□□ -0.61
CTDNEP1-202ENST00000570380 SCAMP3O14828 347 aaKnown RBP11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 OGTO15294 1046 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 ATXN1LP0C7T5 689 aaKnown RBP11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 PLS3P13797 630 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 ITPKBP27987 946 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 EIF2DP41214 584 aaKnown RBP11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 GRIA2P42262 883 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 ABCG1P45844 678 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 TAF6P49848 677 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 ATP2C1P98194 919 aaPredicted RBP11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 KDSRQ06136 332 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 RAD51AP2Q09MP3 1159 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 TMEM132DQ14C87 1099 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 NFE2Q16621 373 aaPredicted RBP11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 RHBDF2Q6PJF5 856 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 KCNK18Q7Z418 384 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 CD302Q8IX05 232 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 RGL4Q8IZJ4 473 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 PHTF2Q8N3S3 785 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 C4orf32Q8N8J7 132 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 BAHD1Q8TBE0 780 aaPredicted RBP11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 SNX29Q8TEQ0 813 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 LEO1Q8WVC0 666 aaPredicted RBP11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 BICD1Q96G01 975 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 CCSER1Q9C0I3 900 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 FAM124BQ9H5Z6 455 aaPredicted RBP11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 PRORYQ9H606 182 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 IL21RQ9HBE5 538 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 HCN2Q9UL51 889 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 STK24Q9Y6E0 443 aa11.22□□□□□ -0.61
CTDNEP1-202ENST00000570380 ATMQ13315 3056 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 FAM149AA5PLN7 773 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 REC8O95072 547 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 GUCY2CP25092 1073 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 MAOBP27338 520 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 CDC25AP30304 524 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 LIG4P49917 911 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 SMTNP53814 917 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 TSPY1Q01534 308 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 RESTQ13127 1097 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 ORC2Q13416 577 aaPredicted RBP11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 KYAT1Q16773 422 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 CCDC142Q17RM4 750 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 NECAB1Q8N987 351 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 FSIP1Q8NA03 581 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 PKMYT1Q99640 499 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 TIPINQ9BVW5 301 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 ZDHHC5Q9C0B5 715 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 ABCB6Q9NP58 842 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 CD93Q9NPY3 652 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 DPP3Q9NY33 737 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 SUSD2Q9UGT4 822 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 KCNG1Q9UIX4 513 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 CPSF3Q9UKF6 684 aaKnown RBP11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 CYP8B1Q9UNU6 501 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 DERAQ9Y315 318 aa11.21□□□□□ -0.61
CTDNEP1-202ENST00000570380 TP53BP1Q12888 1972 aaPredicted RBP11.21□□□□□ -0.62
CTDNEP1-202ENST00000570380 COL6A6A6NMZ7 2263 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 MGAQ8IWI9 3026 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 HECTD1Q9ULT8 2610 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 A0A1W2PQF6 199 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 PP2D1A8MPX8 630 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 KPNA7A9QM74 516 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 J3QKU1 62 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 ZNF217O75362 1048 aa11.2□□□□□ -0.62
CTDNEP1-202ENST00000570380 HOXB2P14652 356 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms