RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 SEMA4GQ9NTN9 838 aa7.74□□□□□ -1.17
CNOT1-218ENST00000569732 ARHGAP28Q9P2N2 729 aa7.74□□□□□ -1.17
CNOT1-218ENST00000569732 ODF2LQ9ULJ1 636 aa7.74□□□□□ -1.17
CNOT1-218ENST00000569732 HES2Q9Y543 173 aa7.74□□□□□ -1.17
CNOT1-218ENST00000569732 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.74□□□□□ -1.17
CNOT1-218ENST00000569732 CFAP47Q6ZTR5 3102 aa7.74□□□□□ -1.17
CNOT1-218ENST00000569732 NCOR2Q9Y618 2525 aa7.74□□□□□ -1.17
CNOT1-218ENST00000569732 EP300Q09472 2414 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 INO80B-WBP1J3KQ70 363 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 CCL16O15467 120 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 CELA3AP09093 270 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 PLS3P13797 630 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 MCM4P33991 863 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 EIF4A3P38919 411 aaKnown RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 NAMPTP43490 491 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 NPTX2P47972 431 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 NCKAP1LP55160 1127 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 SHC2P98077 582 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 MBTD1Q05BQ5 628 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 TUSC3Q13454 348 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 RAB33AQ14088 237 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 FAM171A1Q5VUB5 890 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 PRSS55Q6UWB4 352 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 DYMQ7RTS9 669 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 CEP57Q86XR8 500 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 ELOA2Q8IYF1 753 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 TMEM161BQ8NDZ6 487 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 SPATA20Q8TB22 786 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 CPB2Q96IY4 423 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 NTPCRQ9BSD7 190 aaKnown RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 BLZF1Q9H2G9 400 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 CLEC4MQ9H2X3 399 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 NXF3Q9H4D5 531 aaKnown RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 C17orf75Q9HAS0 396 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 TRPV5Q9NQA5 729 aa7.73□□□□□ -1.17
CNOT1-218ENST00000569732 DNMT3BQ9UBC3 853 aaKnown RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 GPN3Q9UHW5 284 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 MRPS23Q9Y3D9 190 aaKnown RBP7.73□□□□□ -1.17
CNOT1-218ENST00000569732 EPG5Q9HCE0 2579 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 TCHHQ07283 1943 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 CACNA1BQ00975 2339 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 GOLGA6L4A6NEF3 574 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 SHISA7A6NL88 538 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 ENC1O14682 589 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 MYL1P05976 194 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 ARF4P18085 180 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-218ENST00000569732 ALAS2P22557 587 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 AKAP5P24588 427 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 PMLP29590 882 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 AFMP43652 599 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 LIG3P49916 1009 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 CASP5P51878 434 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 LIMK1P53667 647 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 MLLT6P55198 1093 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-218ENST00000569732 PEX3P56589 373 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 SIM2Q14190 667 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-218ENST00000569732 LPAL2Q16609 132 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 IL31Q6EBC2 164 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 C1orf228Q6PIY5 440 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-218ENST00000569732 PRR23BQ6ZRT6 265 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 UNC13DQ70J99 1090 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 EPM2AIP1Q7L775 607 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-218ENST00000569732 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-218ENST00000569732 SFR1Q86XK3 245 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 CEP57L1Q8IYX8 460 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 PHC3Q8NDX5 983 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 IRF7Q92985 503 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 MSANTD3Q96H12 275 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 APOL6Q9BWW8 343 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 FZD8Q9H461 694 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 ST6GALNAC4Q9H4F1 302 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 BRD9Q9H8M2 597 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 PARVGQ9HBI0 331 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 OLFML3Q9NRN5 406 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 HCFC1R1Q9NWW0 138 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 FRRS1LQ9P0K9 344 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 MTRRQ9UBK8 725 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 ADAMTS1Q9UHI8 967 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 NAGPAQ9UK23 515 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 NDRG2Q9UN36 371 aaKnown RBP7.72□□□□□ -1.17
CNOT1-218ENST00000569732 TLR6Q9Y2C9 796 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 COL4A2P08572 1712 aa7.72□□□□□ -1.17
CNOT1-218ENST00000569732 ASPMQ8IZT6 3477 aa7.71□□□□□ -1.17
CNOT1-218ENST00000569732 ELOA3CA0A087WX78 387 aaPredicted RBP7.71□□□□□ -1.18
CNOT1-218ENST00000569732 A0A1B0GUA9 196 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 PVALEFA0A1B0GWK0 134 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 LRRIQ4A6NIV6 560 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 ELOA3DA6NLF2 546 aaPredicted RBP7.71□□□□□ -1.18
CNOT1-218ENST00000569732 TMEM189-UBE2V1I3L0A0 370 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 ABLIM1O14639 778 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 ZNF197O14709 1029 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 SLC16A4O15374 487 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 B4GALT5O43286 388 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 TBCAO75347 108 aaKnown RBP7.71□□□□□ -1.18
CNOT1-218ENST00000569732 PAPSS2O95340 614 aaPredicted RBP7.71□□□□□ -1.18
CNOT1-218ENST00000569732 THP07101 528 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 RHOP08100 348 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 GAP43P17677 238 aa7.71□□□□□ -1.18
CNOT1-218ENST00000569732 PTPN2P17706 415 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms