RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 FBXO4Q9UKT5 387 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 NDRG2Q9UN36 371 aaKnown RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 MRPS17Q9Y2R5 130 aaKnown RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 R4GN57 208 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 EP300Q09472 2414 aaPredicted RBP8.34□□□□□ -1.07
CDH3-209ENST00000569080 SPTBN4Q9H254 2564 aa8.34□□□□□ -1.07
CDH3-209ENST00000569080 A8MXQ7 604 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 DPYSL4O14531 572 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 TNFRSF10BO14763 440 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 TRIM66O15016 1216 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 PHACTR2O75167 634 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 KIF20AO95235 890 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 OAS1P00973 400 aaKnown RBP8.33□□□□□ -1.08
CDH3-209ENST00000569080 HLA-DRAP01903 254 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 AVPR1AP37288 418 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 PIK3CAP42336 1068 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 VAMP7P51809 220 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 PMS1P54277 932 aaKnown RBP8.33□□□□□ -1.08
CDH3-209ENST00000569080 FAM160A1Q05DH4 1040 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 INCA1Q0VD86 236 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 CCINQ13939 588 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 MTF1Q14872 753 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 ZNF667Q5HYK9 610 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 TRIM68Q6AZZ1 485 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 C1orf228Q6PIY5 440 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 Q6ZS52 159 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 DENND5BQ6ZUT9 1274 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 INTS8Q75QN2 995 aaKnown RBP8.33□□□□□ -1.08
CDH3-209ENST00000569080 RALGPS2Q86X27 583 aaPredicted RBP8.33□□□□□ -1.08
CDH3-209ENST00000569080 YAF2Q8IY57 180 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 FAM186BQ8IYM0 893 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 FUKQ8N0W3 1084 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 ZBTB44Q8NCP5 570 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 ZMIZ2Q8NF64 920 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 CSGALNACT1Q8TDX6 532 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 TAS1R2Q8TE23 839 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 TAF4BQ92750 862 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 ERCC4Q92889 916 aaPredicted RBP8.33□□□□□ -1.08
CDH3-209ENST00000569080 NKD2Q969F2 451 aaPredicted RBP8.33□□□□□ -1.08
CDH3-209ENST00000569080 TWNKQ96RR1 684 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 CYP2S1Q96SQ9 504 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 IER2Q9BTL4 223 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 RBM12Q9NTZ6 932 aaKnown RBP8.33□□□□□ -1.08
CDH3-209ENST00000569080 IL37Q9NZH6 218 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 ARHGAP26Q9UNA1 814 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 FRMD4BQ9Y2L6 1034 aa8.33□□□□□ -1.08
CDH3-209ENST00000569080 LAMA1P25391 3075 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 TRAV19A0A0A6YYK7 116 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 FAM92AA1XBS5 289 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 ZNF840PA6NDX5 716 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 NCAM2O15394 837 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 LAMTOR5O43504 91 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 LILRB5O75023 590 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 PAPSS2O95340 614 aaPredicted RBP8.32□□□□□ -1.08
CDH3-209ENST00000569080 CKMP06732 381 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 ARSAP15289 507 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 PFKLP17858 780 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 GRIK1P39086 918 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 PRCPP42785 496 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 GCLMP48507 274 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 ORC1Q13415 861 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 SGSM1Q2NKQ1 1148 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 GAB4Q2WGN9 574 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 ITPRIPL2Q3MIP1 535 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 ZNF658Q5TYW1 1059 aaPredicted RBP8.32□□□□□ -1.08
CDH3-209ENST00000569080 NAIF1Q69YI7 327 aaPredicted RBP8.32□□□□□ -1.08
CDH3-209ENST00000569080 TSSK4Q6SA08 328 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 CRYBG2Q8N1P7 616 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 ARL14EPQ8N8R7 260 aaPredicted RBP8.32□□□□□ -1.08
CDH3-209ENST00000569080 SUMF1Q8NBK3 374 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 TTC8Q8TAM2 541 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 SEMA4DQ92854 862 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 CCDC47Q96A33 483 aaKnown RBP8.32□□□□□ -1.08
CDH3-209ENST00000569080 EEF2KMTQ96G04 330 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 ZFRQ96KR1 1074 aaKnown RBP8.32□□□□□ -1.08
CDH3-209ENST00000569080 TIGD1Q96MW7 591 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 GSDMAQ96QA5 445 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 KCNK16Q96T55 309 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 EBF3Q9H4W6 596 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 CSNK1G1Q9HCP0 422 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 TRPC7Q9HCX4 862 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 GKN1Q9NS71 199 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 KRT82Q9NSB4 513 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 C2orf42Q9NWW7 574 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 PCDHGA2Q9Y5H1 932 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 PCDHA5Q9Y5H7 936 aa8.32□□□□□ -1.08
CDH3-209ENST00000569080 PTPRZ1P23471 2315 aaPredicted RBP8.32□□□□□ -1.08
CDH3-209ENST00000569080 CACNA1AO00555 2505 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 TRIM49BA6NDI0 452 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 K7ESF4 209 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 BEST1O76090 585 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 USP17L7P0C7H9 530 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 ZDHHC11BP0C7U3 371 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 CHRM1P11229 460 aaPredicted RBP8.31□□□□□ -1.08
CDH3-209ENST00000569080 CCDC130P13994 396 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 BMP6P22004 513 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 RPL13P26373 211 aaKnown RBP8.31□□□□□ -1.08
CDH3-209ENST00000569080 ANXA13P27216 316 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 HOXC13P31276 330 aa8.31□□□□□ -1.08
CDH3-209ENST00000569080 GTF2H1P32780 548 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms