RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 MMRN2Q9H8L6 949 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 KIF9Q9HAQ2 790 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 DMAC2Q9NW81 257 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 SMPD4Q9NXE4 827 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 GCNT4Q9P109 453 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 SMG5Q9UPR3 1016 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 PATJQ8NI35 1801 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
GTF3C1-208ENST00000567843 SPTBN2O15020 2390 aa13.02□□□□□ -0.32
GTF3C1-208ENST00000567843 PDXKO00764 312 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 LILRB5O75023 590 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 EGFP01133 1207 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 IFNAR2P48551 515 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 GALK1P51570 392 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 CCINQ13939 588 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 KCNB1Q14721 858 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 ZNF77Q15935 545 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 ZNF667Q5HYK9 610 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 DGKKQ5KSL6 1271 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 FSTL4Q6MZW2 842 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 KRBA2Q6ZNG9 492 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 SPATA17Q96L03 361 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 KCNK16Q96T55 309 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 USP25Q9UHP3 1055 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 ZMYM5Q9UJ78 669 aa13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 NUP210Q8TEM1 1887 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-208ENST00000567843 K7ESF4 209 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 TRIM66O15016 1216 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 TRIM49P0CI25 452 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 TRIM49CP0CI26 452 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 ATICP31939 592 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 GJA4P35212 333 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 ZXDBP98169 803 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 DPYDQ12882 1025 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 TAF10Q12962 218 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 ZNF268Q14587 947 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 PPP2R5DQ14738 602 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 PDGFRLQ15198 375 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 C1orf220Q5T0J3 134 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 C1orf228Q6PIY5 440 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 ACOT1Q86TX2 421 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 SMYD4Q8IYR2 804 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 OSCP1Q8WVF1 389 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 RMDN1Q96DB5 314 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 EEF2KMTQ96G04 330 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 C8orf48Q96LL4 319 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 RNF38Q9H0F5 515 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 EPC1Q9H2F5 836 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 HMGXB4Q9UGU5 601 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 FANCMQ8IYD8 2048 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 FRYLO94915 3013 aa13.01□□□□□ -0.33
GTF3C1-208ENST00000567843 KIF26AQ9ULI4 1882 aaPredicted RBP13□□□□□ -0.33
GTF3C1-208ENST00000567843 FAM237AA0A1B0GTK4 181 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 ZNF840PA6NDX5 716 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 ANTXRLA6NF34 631 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 HRO43593 1189 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 CALUO43852 315 aaPredicted RBP13□□□□□ -0.33
GTF3C1-208ENST00000567843 RNF40O75150 1001 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 AKAP3O75969 853 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 ZNF202O95125 648 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 HLA-DRAP01903 254 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 CCDC130P13994 396 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 GCLMP48507 274 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 NRLP54845 237 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 GRSF1Q12849 480 aaKnown RBP eCLIP13□□□□□ -0.33
GTF3C1-208ENST00000567843 USP4Q13107 963 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 EML3Q32P44 896 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 TMEM196Q5HYL7 178 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 PAQR9Q6ZVX9 377 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 SV2AQ7L0J3 742 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 FAM35AQ86V20 835 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 SLC9A9Q8IVB4 645 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 CPA6Q8N4T0 437 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 CCDC47Q96A33 483 aaKnown RBP13□□□□□ -0.33
GTF3C1-208ENST00000567843 FAM126AQ9BYI3 521 aaPredicted RBP13□□□□□ -0.33
GTF3C1-208ENST00000567843 ELOVL4Q9GZR5 314 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 FAM49BQ9NUQ9 324 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 CHORDC1Q9UHD1 332 aaPredicted RBP13□□□□□ -0.33
GTF3C1-208ENST00000567843 USP18Q9UMW8 372 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 FRMD4BQ9Y2L6 1034 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 CPQQ9Y646 472 aa13□□□□□ -0.33
GTF3C1-208ENST00000567843 SOBPA7XYQ1 873 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 LEFTY2O00292 366 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 TRDMT1O14717 391 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 RHOBTB3O94955 611 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 FAM163BP0C2L3 166 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 MBL2P11226 248 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 NR2F2P24468 414 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 YWHAQP27348 245 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 PIK3CAP42336 1068 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 VAMP7P51809 220 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 NDST1P52848 882 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 AP3M2P53677 418 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms