RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 FAM160B2Q86V87 743 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 ULK2Q8IYT8 1036 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 TTLL6Q8N841 843 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 NIPA2Q8N8Q9 360 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 B4GALNT2Q8NHY0 566 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 FBXO27Q8NI29 283 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 HAPLN3Q96S86 360 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 DDX50Q9BQ39 737 aaKnown RBP16.39■□□□□ 0.21
COMMD4-215ENST00000566843 NDE1Q9NXR1 346 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 TCRBV7S3A2A0A539 114 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 H3BRJ5 948 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 EXTL3O43909 919 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 TMEM63AO94886 807 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 CALB1P05937 261 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 CPA2P48052 419 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 FAAP100Q0VG06 881 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 CDC16Q13042 620 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 CBLBQ13191 982 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 TMEM270Q6UE05 265 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 SDCCAG8Q86SQ7 713 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-215ENST00000566843 TRIM42Q8IWZ5 723 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 PDIK1LQ8N165 341 aa16.39■□□□□ 0.21
COMMD4-215ENST00000566843 SRCAPQ6ZRS2 3230 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 SPECC1L-ADORA2AF8WAN1 911 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 FKBP6O75344 327 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 ENO1P06733 434 aaKnown RBP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 ZCCHC18P0CG32 403 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 SSTR3P32745 418 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 OTUD4Q01804 1114 aaKnown RBP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 PIGHQ14442 188 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 TBCCQ15814 346 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 BBS9Q3SYG4 887 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 AAGABQ6PD74 315 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 PODNQ7Z5L7 613 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 TTC13Q8NBP0 860 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 ACTL9Q8TC94 416 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 CENPKQ9BS16 269 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 C1orf21Q9H246 121 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 GINM1Q9NU53 330 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 SLC7A8Q9UHI5 535 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 SH3BP1Q9Y3L3 701 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 G3V3G9 751 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 PYGBP11216 843 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 JAK3P52333 1124 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 MRPS9P82933 396 aaKnown RBP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 ZNF200P98182 395 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 GHRHRQ02643 423 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 TAP1Q03518 808 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 TAZQ16635 292 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 RASIP1Q5U651 963 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 LMBRD2Q68DH5 695 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 FAM43BQ6ZT52 329 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 RFX8Q6ZV50 586 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 BBS12Q6ZW61 710 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 POLNQ7Z5Q5 900 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 OLFM3Q96PB7 478 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 CCDC106Q9BWC9 280 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 XPO7Q9UIA9 1087 aaKnown RBP16.38■□□□□ 0.21
COMMD4-215ENST00000566843 COMMD3-BMI1R4GMX3 469 aa16.38■□□□□ 0.21
COMMD4-215ENST00000566843 UTRNP46939 3433 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 HNRNPDLO14979 420 aaKnown RBP16.37■□□□□ 0.21
COMMD4-215ENST00000566843 TBXAS1P24557 533 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-215ENST00000566843 ZNF132P52740 706 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 LSAMPQ13449 338 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 TBC1D25Q3MII6 688 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 DNAJC24Q6P3W2 148 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 ACAD11Q709F0 780 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 TAS1R3Q7RTX0 852 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 IGDCC3Q8IVU1 814 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 UBR7Q8N806 425 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 ACSF2Q96CM8 615 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-215ENST00000566843 MCEEQ96PE7 176 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 ZCWPW1Q9H0M4 648 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 DBNDD1Q9H9R9 158 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 PNPLA8Q9NP80 782 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 SERPINA10Q9UK55 444 aa16.37■□□□□ 0.21
COMMD4-215ENST00000566843 ZNF646O15015 1829 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-215ENST00000566843 TCRBV9S1A1TA0A576 114 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 SPAG6O75602 509 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 STIP1P31948 543 aaKnown RBP16.36■□□□□ 0.21
COMMD4-215ENST00000566843 PTGER2P43116 358 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 WNT7BP56706 349 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 MTMR1Q13613 665 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 DACT2Q5SW24 774 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 STRIP1Q5VSL9 837 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 ANO5Q75V66 913 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 MARK2Q7KZI7 788 aaKnown RBP16.36■□□□□ 0.21
COMMD4-215ENST00000566843 STKLD1Q8NE28 680 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 ZNF606Q8WXB4 792 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 NDNQ99608 321 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 WWP1Q9H0M0 922 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 PPARGC1AQ9UBK2 798 aaKnown RBP16.36■□□□□ 0.21
COMMD4-215ENST00000566843 PTPRJQ12913 1337 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 I3L4J1 428 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 RNASEH1O60930 286 aaKnown RBP16.36■□□□□ 0.21
COMMD4-215ENST00000566843 LSM8O95777 96 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms