RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 NME7Q9Y5B8 376 aa13.19□□□□□ -0.3
KLHDC4-216ENST00000566561 CNOT1A5YKK6 2376 aaKnown RBP13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 CACNA1GO43497 2377 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 TRAV19A0A0A6YYK7 116 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 F8VP50 259 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 SPECC1L-ADORA2AF8WAN1 911 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 IKBKBO14920 756 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 MAPK13O15264 365 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 TADA3O75528 432 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 VNN1O95497 513 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 CKMP06732 381 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 USP17L7P0C7H9 530 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 PSMC2P35998 433 aaKnown RBP13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 MLLT6P55198 1093 aaPredicted RBP13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 TNK2Q07912 1038 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 ADAM9Q13443 819 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 PNOCQ13519 176 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 ITPRIPL2Q3MIP1 535 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 ZACNQ401N2 412 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 INTS8Q75QN2 995 aaKnown RBP13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 RALGPS2Q86X27 583 aaPredicted RBP13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 FAM186BQ8IYM0 893 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 SMYD4Q8IYR2 804 aaPredicted RBP13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 TNIP3Q96KP6 325 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 CEP295NLQ96MC4 621 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 MED10Q9BTT4 135 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 IMPG2Q9BZV3 1241 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 ZNF518BQ9C0D4 1074 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 ELOVL4Q9GZR5 314 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 RMND1Q9NWS8 449 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 EHD2Q9NZN4 543 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 USP18Q9UMW8 372 aa13.18□□□□□ -0.3
KLHDC4-216ENST00000566561 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 CLDN5O00501 218 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 AKAP3O75969 853 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 KRT37O76014 449 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 TRIM49P0CI25 452 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 TRIM49CP0CI26 452 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 CTHP32929 405 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 USP46P62068 366 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 FAM160A1Q05DH4 1040 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 IFRD2Q12894 506 aaPredicted RBP13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 MTAPQ13126 283 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 LRRC32Q14392 662 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 PPP2R5DQ14738 602 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 NFIL3Q16649 462 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 FMR1NBQ8N0W7 255 aaPredicted RBP13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 ZNF687Q8N1G0 1237 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 ARL14EPQ8N8R7 260 aaPredicted RBP13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 TAF4BQ92750 862 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 C8orf48Q96LL4 319 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 RTKNQ9BST9 563 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 B3GNT5Q9BYG0 378 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 EPC1Q9H2F5 836 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 CHRDQ9H2X0 955 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 MMRN2Q9H8L6 949 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 ZSCAN32Q9NX65 697 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 TRPM5Q9NZQ8 1165 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 GMEB2Q9UKD1 530 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 TCHHQ07283 1943 aa13.17□□□□□ -0.3
KLHDC4-216ENST00000566561 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 TICRRQ7Z2Z1 1910 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 C2orf78A6NCI8 922 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 SMC2O95347 1197 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 ABL1P00519 1130 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 HLA-DRAP01903 254 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 CHRNB1P11230 501 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 HDCP19113 662 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 TRIM21P19474 475 aaKnown RBP13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 GCLMP48507 274 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 PDE6CP51160 858 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 CACNA2D1P54289 1103 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 RUNX3Q13761 415 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 ZNF268Q14587 947 aaPredicted RBP13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 MTF1Q14872 753 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 PON2Q15165 354 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 C1orf220Q5T0J3 134 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 TRIM68Q6AZZ1 485 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 SPOPLQ6IQ16 392 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 TXNDC11Q6PKC3 985 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 ACOT1Q86TX2 421 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 SLC22A12Q96S37 553 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 FAM83CQ9BQN1 747 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 IER2Q9BTL4 223 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 SDCBP2Q9H190 292 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 EBF3Q9H4W6 596 aa13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 RBM12Q9NTZ6 932 aaKnown RBP13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
KLHDC4-216ENST00000566561 SPAG17Q6Q759 2223 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 CETN3O15182 167 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 ASS1P00966 412 aaKnown RBP13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 EPB41P11171 864 aaKnown RBP13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 ARSAP15289 507 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 PRCPP42785 496 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 PPP3CCP48454 512 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms