RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 PCDH17O14917 1159 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 SRGAP2O75044 1071 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 VIPP01282 170 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 POLBP06746 335 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 ANXA6P08133 673 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 ITGALP20701 1170 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 TNFAIP3P21580 790 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 FGFR4P22455 802 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 BCAT1P54687 386 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 GEMIN4P57678 1058 aaKnown RBP5.81□□□□□ -1.48
CNOT1-209ENST00000566240 HSD11B2P80365 405 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 HHEXQ03014 270 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 G3BP1Q13283 466 aaKnown RBP eCLIP5.81□□□□□ -1.482e-6■□□□□ 11.1
CNOT1-209ENST00000566240 ATP1A4Q13733 1029 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 ATPAF1Q5TC12 328 aaPredicted RBP5.81□□□□□ -1.48
CNOT1-209ENST00000566240 NAIF1Q69YI7 327 aaPredicted RBP5.81□□□□□ -1.48
CNOT1-209ENST00000566240 FOXR2Q6PJQ5 311 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 TMPRSS9Q7Z410 1059 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 MAATS1Q7Z4T9 603 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 PCGF5Q86SE9 256 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 C2CD5Q86YS7 1000 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 HERC6Q8IVU3 1022 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 SP8Q8IXZ3 490 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 COLGALT2Q8IYK4 626 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.81□□□□□ -1.48
CNOT1-209ENST00000566240 SCAMP5Q8TAC9 235 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 DNAJB14Q8TBM8 379 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 ASB12Q8WXK4 309 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 RSC1A1Q92681 617 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 GRAMD1AQ96CP6 724 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 MNTQ99583 582 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 ZSWIM1Q9BR11 485 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 CXorf36Q9H7Y0 433 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 PPP4R1LQ9P1A2 415 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 IFT80Q9P2H3 777 aaPredicted RBP5.81□□□□□ -1.48
CNOT1-209ENST00000566240 DUSP10Q9Y6W6 482 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 ZNF536O15090 1300 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 NPEPPSL1A6NEC2 478 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 GOLGA6L6A8MZA4 724 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 ZNF185O15231 689 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 CD3EAPO15446 510 aaKnown RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 FOXS1O43638 330 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 GPANK1O95872 356 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 ARP10275 920 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 BDNFP23560 247 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 APOBEC3AP31941 199 aaPredicted RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 ANXA11P50995 505 aaKnown RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 RNASE9P60153 205 aaKnown RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 MC2RQ01718 297 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 SCAPQ12770 1279 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 GPS1Q13098 491 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 CUL4BQ13620 913 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 EFR3AQ14156 821 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 E2F2Q14209 437 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 ABLIM2Q6H8Q1 611 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 RETSATQ6NUM9 610 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 HTR3DQ70Z44 454 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 POLNQ7Z5Q5 900 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 LRRTM4Q86VH4 590 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 SGMS1Q86VZ5 419 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 NRSN1Q8IZ57 195 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 Q8NA96 180 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 SYT8Q8NBV8 401 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 SIMC1Q8NDZ2 872 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 SLC30A5Q8TAD4 765 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 THAP4Q8WY91 577 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 ZNF668Q96K58 619 aaPredicted RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 SEC62Q99442 399 aaKnown RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 TAF1DQ9H5J8 278 aaPredicted RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 GBA2Q9HCG7 927 aaPredicted RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 SEPSECSQ9HD40 501 aaKnown RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 DNAJB11Q9UBS4 358 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 FEM1BQ9UK73 627 aa5.8□□□□□ -1.48
CNOT1-209ENST00000566240 NDRG4Q9ULP0 352 aaKnown RBP5.8□□□□□ -1.48
CNOT1-209ENST00000566240 SPATA31A3Q5VYP0 1347 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 CAPN14A8MX76 684 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 TISP43B9A030 160 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 DIRC3C9JPN6 131 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 ERN1O75460 977 aaKnown RBP5.79□□□□□ -1.48
CNOT1-209ENST00000566240 RHOBTB3O94955 611 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 HLA-DOAP06340 250 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 PPIFP30405 207 aaKnown RBP5.79□□□□□ -1.48
CNOT1-209ENST00000566240 NDUFV1P49821 464 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 PAPOLAP51003 745 aaKnown RBP5.79□□□□□ -1.48
CNOT1-209ENST00000566240 PRKAA2P54646 552 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 OCA2Q04671 838 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 DYRK1AQ13627 763 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 ARHGAP40Q5TG30 622 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 SFRP4Q6FHJ7 346 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-209ENST00000566240 RSRC2Q7L4I2 434 aaKnown RBP5.79□□□□□ -1.48
CNOT1-209ENST00000566240 CLNKQ7Z7G1 428 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 TMTC1Q8IUR5 882 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 SLC15A3Q8IY34 581 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 ESX1Q8N693 406 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 CPT1CQ8TCG5 803 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 ABHD5Q8WTS1 349 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 AFG1LQ8WV93 481 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 ZDHHC12Q96GR4 267 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 MAELQ96JY0 434 aaKnown RBP5.79□□□□□ -1.48
CNOT1-209ENST00000566240 DCLRE1CQ96SD1 692 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms