RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 H3BNC9 293 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 AP3B1O00203 1094 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 ARNTLO00327 626 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 DYNC1I1O14576 645 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 SLC22A3O75751 556 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 IFNB1P01574 187 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 SNRPB2P08579 225 aaKnown RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 GGT5P36269 586 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 ATP5OP48047 213 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 ARF3P61204 181 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 ARF1P84077 181 aaKnown RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 CREB5Q02930 508 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 GALNT2Q10471 571 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 PKN1Q16512 942 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 HSP90B2PQ58FF3 399 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 EARS2Q5JPH6 523 aaKnown RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 RAB44Q7Z6P3 723 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 RIOX2Q8IUF8 465 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 SUPT20HQ8NEM7 779 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 NEDD1Q8NHV4 660 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 KAT5Q92993 513 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 FAM81BQ96LP2 452 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 ELF4Q99607 663 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 MMADHCQ9H3L0 296 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 NOC2LQ9Y3T9 749 aaKnown RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 ASNA1O43681 348 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 LPLP06858 475 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 FERP16591 822 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 NME2P22392 152 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 BEX3Q00994 111 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 CXCL9Q07325 125 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 FOXP4Q8IVH2 680 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 ADGRG2Q8IZP9 1017 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 TOR1AIP2Q8NFQ8 470 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 RABGGTAQ92696 567 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 PTP4A1Q93096 173 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 C7orf26Q96N11 449 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 CRNKL1Q9BZJ0 848 aaKnown RBP11.32□□□□□ -0.6
UBFD1-205ENST00000566136 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 TUBE1Q9UJT0 475 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 AP1M2Q9Y6Q5 423 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 ADAMTSL1Q8N6G6 1762 aa11.32□□□□□ -0.6
UBFD1-205ENST00000566136 FAM237AA0A1B0GTK4 181 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 URADA6NGE7 173 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 AGAP14A8MT82 685 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 UBOX5O94941 541 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 EPN2O95208 641 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 PNLIPRP1P54315 467 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 ADAM15Q13444 863 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 GTF2IRD2BQ6EKJ0 949 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 USP49Q70CQ1 688 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 TMC6Q7Z403 805 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 GTF2IRD2Q86UP8 949 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 PDZD3Q86UT5 571 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 FAM84AQ96KN4 292 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 BPIFA3Q9BQP9 254 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 RNF26Q9BY78 433 aaPredicted RBP11.31□□□□□ -0.6
UBFD1-205ENST00000566136 ANO3Q9BYT9 981 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 BRF2Q9HAW0 419 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 PCDHA5Q9Y5H7 936 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 WNT7AO00755 349 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 POLR2DO15514 142 aaKnown RBP11.31□□□□□ -0.6
UBFD1-205ENST00000566136 RAD17O75943 681 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 RBM5P52756 815 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBFD1-205ENST00000566136 TROAPQ12815 778 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 BMPR2Q13873 1038 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 TPD52L1Q16890 204 aaPredicted RBP11.31□□□□□ -0.6
UBFD1-205ENST00000566136 C3orf38Q5JPI3 329 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
UBFD1-205ENST00000566136 ADAMTS15Q8TE58 950 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 GPR63Q9BZJ6 419 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 TTYH1Q9H313 450 aaPredicted RBP11.31□□□□□ -0.6
UBFD1-205ENST00000566136 MOSPD1Q9UJG1 213 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
UBFD1-205ENST00000566136 MAN2B2Q9Y2E5 1009 aa11.31□□□□□ -0.6
UBFD1-205ENST00000566136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBFD1-205ENST00000566136 PIP5K1BO14986 540 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 CCZ1BP86790 482 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 CCZ1P86791 482 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-205ENST00000566136 TNIP1Q15025 636 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 ZNF805Q5CZA5 627 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 TTC39CQ8N584 583 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 DRAXINQ8NBI3 349 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-205ENST00000566136 RNF139Q8WU17 664 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 HSD3B7Q9H2F3 369 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 KCNH4Q9UQ05 1017 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 GPR45Q9Y5Y3 372 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 A0A0U1RQK1 487 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 ZNF320A2RRD8 509 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 SFTPCP11686 197 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 LCP1P13796 627 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 TPM4P67936 248 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 GRIK5Q16478 980 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 HSP90AA4PQ58FG1 418 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 IER5Q5VY09 327 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 ZNF574Q6ZN55 896 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms