RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 COMMD8Q9NX08 183 aa10.36□□□□□ -0.75
SF3B3-207ENST00000566095 CNOT8Q9UFF9 292 aaKnown RBP10.36□□□□□ -0.75
SF3B3-207ENST00000566095 B4GALT3O60512 393 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 CTSAP10619 480 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 CCDC130P13994 396 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 ABCB4P21439 1286 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 MCM3P25205 808 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 MAN1A1P33908 653 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 CA8P35219 290 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 GRIK1P39086 918 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 GABRB2P47870 512 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 NDUFV1P49821 464 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 PTP4A2Q12974 167 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 ORC1Q13415 861 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 VEPH1Q14D04 833 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 ACAP1Q15027 740 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 SHHQ15465 462 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 GLE1Q53GS7 698 aaKnown RBP10.35□□□□□ -0.75
SF3B3-207ENST00000566095 EFHC1Q5JVL4 640 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 SCARA3Q6AZY7 606 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 DENND1BQ6P3S1 775 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 MMS22LQ6ZRQ5 1243 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 MON1BQ7L1V2 547 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 ARCQ7LC44 396 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 TMC7Q7Z402 723 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 RNF168Q8IYW5 571 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-207ENST00000566095 ARHGAP18Q8N392 663 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 GPR161Q8N6U8 529 aaKnown RBP10.35□□□□□ -0.75
SF3B3-207ENST00000566095 C12orf29Q8N999 325 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 C3orf20Q8ND61 904 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 FBXO22Q8NEZ5 403 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-207ENST00000566095 ZNF564Q8TBZ8 553 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-207ENST00000566095 FNIP1Q8TF40 1166 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 PCDHB18PQ96TA0 734 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 NAP1L3Q99457 506 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-207ENST00000566095 GDF15Q99988 308 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 C11orf70Q9BRQ4 267 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 CARD9Q9H257 536 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 CRTAC1Q9NQ79 661 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 CNGB3Q9NQW8 809 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 ENTPD7Q9NQZ7 604 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 ASNSD1Q9NWL6 643 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 AFF4Q9UHB7 1163 aaKnown RBP10.35□□□□□ -0.75
SF3B3-207ENST00000566095 IP6K2Q9UHH9 426 aa10.35□□□□□ -0.75
SF3B3-207ENST00000566095 MACROD2A1Z1Q3 448 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 CCDC66A2RUB6 948 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 CTAGE15A4D2H0 777 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 LINC01553A4QN01 128 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 MYO1FO00160 1098 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 FANCGO15287 622 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 RTN3O95197 1032 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-207ENST00000566095 GLI1P08151 1106 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 CTAGE8P0CG41 777 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 PBX3P40426 434 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 PAFAH1B1P43034 410 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 PDE4CQ08493 712 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 TAF12Q16514 161 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 PKDCCQ504Y2 493 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 RTP2Q5QGT7 225 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 OR6B2Q6IFH4 312 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 PLEKHA7Q6IQ23 1121 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 CCDC149Q6ZUS6 474 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 TMEM110Q86TL2 294 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 CTAGE6Q86UF2 777 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 CTAGE4Q8IX94 777 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 TDHQ8IZJ6 230 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 FUKQ8N0W3 1084 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 SCML4Q8N228 414 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 TMEM130Q8N3G9 435 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 KLHL23Q8NBE8 558 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 OR10T2Q8NGX3 314 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 UBA3Q8TBC4 463 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 SLC35G2Q8TBE7 412 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 ACTRT1Q8TDG2 376 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 SLC35F5Q8WV83 523 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.34□□□□□ -0.75
SF3B3-207ENST00000566095 IRGQQ8WZA9 623 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 UBXN4Q92575 508 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 HES6Q96HZ4 224 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 C8orf48Q96LL4 319 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 NUP85Q9BW27 656 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 TLR10Q9BXR5 811 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 B3GNT5Q9BYG0 378 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 IRX2Q9BZI1 471 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-207ENST00000566095 THAP2Q9H0W7 228 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 ZBP1Q9H171 429 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 SLC28A3Q9HAS3 691 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 CSNK1G1Q9HCP0 422 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 ACP6Q9NPH0 428 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 TLR9Q9NR96 1032 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 ABI2Q9NYB9 513 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-207ENST00000566095 RRN3Q9NYV6 651 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.34□□□□□ -0.75
SF3B3-207ENST00000566095 IRAK3Q9Y616 596 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 CDY1Q9Y6F8 540 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 CAPN6Q9Y6Q1 641 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 DUSP10Q9Y6W6 482 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 TSC2P49815 1807 aa10.34□□□□□ -0.75
SF3B3-207ENST00000566095 UQCRHLA0A096LP55 91 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms