RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 ODC1P11926 461 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 FDPSP14324 419 aaKnown RBP12.02□□□□□ -0.49
CAPN3-215ENST00000565559 XBP1P17861 261 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 CYP11B2P19099 503 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 GGCXP38435 758 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 ST3GAL1Q11201 340 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 SMARCB1Q12824 385 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 ZNF77Q15935 545 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 TAF1BQ53T94 588 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-215ENST00000565559 PIK3AP1Q6ZUJ8 805 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 TMEM150AQ86TG1 271 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 CCDC83Q8IWF9 413 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 TRIML1Q8N9V2 468 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 IL17RCQ8NAC3 791 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 BAP1Q92560 729 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 DRC1Q96MC2 740 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 HSPA12BQ96MM6 686 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 ACO2Q99798 780 aaKnown RBP12.02□□□□□ -0.49
CAPN3-215ENST00000565559 TMEM206Q9H813 350 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 PRDM16Q9HAZ2 1276 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 TRPC7Q9HCX4 862 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 PHLPP2Q6ZVD8 1323 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 TNRC6BQ9UPQ9 1833 aaKnown RBP12.02□□□□□ -0.49
CAPN3-215ENST00000565559 TRAV19A0A0A6YYK7 116 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 FAM149AA5PLN7 773 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 ARHGEF35A5YM69 484 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 ERVH48-1M5A8F1 160 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 ZNF217O75362 1048 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 CD2BP2O95400 341 aaKnown RBP12.01□□□□□ -0.49
CAPN3-215ENST00000565559 NTRK1P04629 796 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 APODP05090 189 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 ATXN1LP0C7T5 689 aaKnown RBP12.01□□□□□ -0.49
CAPN3-215ENST00000565559 HARSP12081 509 aaKnown RBP12.01□□□□□ -0.49
CAPN3-215ENST00000565559 EIF2S3P41091 472 aaKnown RBP12.01□□□□□ -0.49
CAPN3-215ENST00000565559 OPRD1P41143 372 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 AARSP49588 968 aaKnown RBP eCLIP12.01□□□□□ -0.49
CAPN3-215ENST00000565559 HMGN5P82970 282 aaKnown RBP12.01□□□□□ -0.49
CAPN3-215ENST00000565559 GRIK2Q13002 908 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 USP4Q13107 963 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 NPY5RQ15761 445 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 WDR45BQ5MNZ6 344 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 MARCH9Q86YJ5 346 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 ENGASEQ8NFI3 743 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 SPATA18Q8TC71 538 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 SPPL2BQ8TCT7 592 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 KIFAP3Q92845 792 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 TMX3Q96JJ7 454 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 ARID3AQ99856 593 aa12.01□□□□□ -0.49
CAPN3-215ENST00000565559 USB1Q9BQ65 265 aaKnown RBP12.01□□□□□ -0.49
CAPN3-215ENST00000565559 UXTQ9UBK9 157 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-215ENST00000565559 MAGED2Q9UNF1 606 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-215ENST00000565559 ADAMTS9Q9P2N4 1935 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 FLRT2O43155 660 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 XPOTO43592 962 aaKnown RBP12□□□□□ -0.49
CAPN3-215ENST00000565559 NDUFS2O75306 463 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 DKK1O94907 266 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 CER1O95813 267 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 ZNF883P0CG24 379 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 CSH1P0DML2 217 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 CSH2P0DML3 217 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 LRPAP1P30533 357 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 CALCRLQ16602 461 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 MPZL3Q6UWV2 235 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 TRMT11Q7Z4G4 463 aaKnown RBP12□□□□□ -0.49
CAPN3-215ENST00000565559 FAM181AQ8N9Y4 354 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 RHBDD1Q8TEB9 315 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 FOXJ1Q92949 421 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 AIFM3Q96NN9 605 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 PNKPQ96T60 521 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 PTPRHQ9HD43 1115 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 TOR4AQ9NXH8 423 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 CALCOCO1Q9P1Z2 691 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 KCNJ14Q9UNX9 436 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 PIEZO2Q9H5I5 2752 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 KIAA1549LQ6ZVL6 1849 aa12□□□□□ -0.49
CAPN3-215ENST00000565559 USP9XQ93008 2570 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-215ENST00000565559 CCDC169A6NNP5 214 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 JAK2O60674 1132 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 KAT7O95251 611 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 WISP1O95388 367 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 HAPLN1P10915 354 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-215ENST00000565559 HMGA1P17096 107 aaKnown RBP11.99□□□□□ -0.49
CAPN3-215ENST00000565559 CYP3A5P20815 502 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 PAX3P23760 479 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 TXKP42681 527 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 KCNB1Q14721 858 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 SUZ12Q15022 739 aaKnown RBP11.99□□□□□ -0.49
CAPN3-215ENST00000565559 SMAD1Q15797 465 aaKnown RBP11.99□□□□□ -0.49
CAPN3-215ENST00000565559 C6orf118Q5T5N4 469 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 IL27RAQ6UWB1 636 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 SLC41A1Q8IVJ1 513 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 THEM5Q8N1Q8 247 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 OR10T2Q8NGX3 314 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 BAHD1Q8TBE0 780 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-215ENST00000565559 SH3RF2Q8TEC5 729 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 TARS2Q9BW92 718 aaKnown RBP11.99□□□□□ -0.49
CAPN3-215ENST00000565559 ZCWPW1Q9H0M4 648 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 LINC00597Q9H2U6 94 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 TUFT1Q9NNX1 390 aa11.99□□□□□ -0.49
CAPN3-215ENST00000565559 TM7SF3Q9NS93 570 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms