RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 MAGEA11P43364 429 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 GALK1P51570 392 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 AMPD2Q01433 879 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 MTF1Q14872 753 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 C4orf50Q6ZRC1 276 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 CEP68Q76N32 757 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 HS2ST1Q7LGA3 356 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 TRAPPC11Q7Z392 1133 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 WDR5BQ86VZ2 330 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 MYLPFQ96A32 169 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 MMS19Q96T76 1030 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 CRTAC1Q9NQ79 661 aa20.2■□□□□ 0.82
SPSB3-207ENST00000565550 BIN1O00499 593 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 ATG13O75143 517 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 CST3P01034 146 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-207ENST00000565550 EGFP01133 1207 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 CKMP06732 381 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 DLATP10515 647 aaKnown RBP20.19■□□□□ 0.82
SPSB3-207ENST00000565550 WARSP23381 471 aaKnown RBP20.19■□□□□ 0.82
SPSB3-207ENST00000565550 BDNFP23560 247 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 PRCPP42785 496 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 PXNP49023 591 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-207ENST00000565550 CASP4P49662 377 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 ZNF77Q15935 545 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 SNRNP35Q16560 246 aaKnown RBP20.19■□□□□ 0.82
SPSB3-207ENST00000565550 NAIF1Q69YI7 327 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-207ENST00000565550 ARL14EPQ8N8R7 260 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-207ENST00000565550 PLEKHO2Q8TD55 490 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 CCDC34Q96HJ3 373 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 RTKNQ9BST9 563 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 GZF1Q9H116 711 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-207ENST00000565550 SEMA4GQ9NTN9 838 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 DUS2Q9NX74 493 aaKnown RBP20.19■□□□□ 0.82
SPSB3-207ENST00000565550 GCNT4Q9P109 453 aa20.19■□□□□ 0.82
SPSB3-207ENST00000565550 KIF26AQ9ULI4 1882 aaPredicted RBP20.18■□□□□ 0.82
SPSB3-207ENST00000565550 DCDC2BA2VCK2 349 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 C2orf78A6NCI8 922 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 LRP3O75074 770 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 RNF40O75150 1001 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 SMC2O95347 1197 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 CD44P16070 742 aaKnown RBP20.18■□□□□ 0.82
SPSB3-207ENST00000565550 TNNI1P19237 187 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 BMP6P22004 513 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 GJA4P35212 333 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 GRIK1P39086 918 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 CYP27A1Q02318 531 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 MAPRE1Q15691 268 aaKnown RBP20.18■□□□□ 0.82
SPSB3-207ENST00000565550 ZNF658Q5TYW1 1059 aaPredicted RBP20.18■□□□□ 0.82
SPSB3-207ENST00000565550 VSTM1Q6UX27 236 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 C12orf56Q8IXR9 622 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 GUF1Q8N442 669 aaKnown RBP20.18■□□□□ 0.82
SPSB3-207ENST00000565550 CPA6Q8N4T0 437 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 FAM160A2Q8N612 972 aaPredicted RBP20.18■□□□□ 0.82
SPSB3-207ENST00000565550 XXYLT1Q8NBI6 393 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 OSCP1Q8WVF1 389 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 SPATA17Q96L03 361 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 GSDMAQ96QA5 445 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 P2RY13Q9BPV8 354 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 MRPL45Q9BRJ2 306 aaKnown RBP20.18■□□□□ 0.82
SPSB3-207ENST00000565550 ECT2Q9H8V3 914 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 POLR3BQ9NW08 1133 aaPredicted RBP20.18■□□□□ 0.82
SPSB3-207ENST00000565550 SLC8A2Q9UPR5 921 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 WNT6Q9Y6F9 365 aa20.18■□□□□ 0.82
SPSB3-207ENST00000565550 DENND4CQ5VZ89 1909 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 PDXKO00764 312 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 EXOC3O60645 756 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 NR3C1P04150 777 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 HDCP19113 662 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 DRD1P21728 446 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 IFNAR2P48551 515 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 CYP24A1Q07973 514 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 CSRP2Q16527 193 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 SH3RF2Q8TEC5 729 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 CCDC127Q96BQ5 260 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 EEF2KMTQ96G04 330 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 PCED1BQ96HM7 432 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 FNBP1Q96RU3 617 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 DMAC2Q9NW81 257 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 NME7Q9Y5B8 376 aa20.17■□□□□ 0.82
SPSB3-207ENST00000565550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.16■□□□□ 0.82
SPSB3-207ENST00000565550 TRIM49BA6NDI0 452 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 GNL1P36915 607 aaPredicted RBP20.16■□□□□ 0.82
SPSB3-207ENST00000565550 PMS1P54277 932 aaKnown RBP20.16■□□□□ 0.82
SPSB3-207ENST00000565550 USP46P62068 366 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 SNRPFP62306 86 aaKnown RBP20.16■□□□□ 0.82
SPSB3-207ENST00000565550 USP4Q13107 963 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 PSMD6Q15008 389 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 EML3Q32P44 896 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 PRR23CQ6ZRP0 262 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 DENND5BQ6ZUT9 1274 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 ELOA2Q8IYF1 753 aaPredicted RBP20.16■□□□□ 0.82
SPSB3-207ENST00000565550 MYCBPAPQ8TBZ2 947 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 CGRRF1Q99675 332 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 LINC00597Q9H2U6 94 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 RMND1Q9NWS8 449 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 HOOK1Q9UJC3 728 aaKnown RBP20.16■□□□□ 0.82
SPSB3-207ENST00000565550 TRAF3IP3Q9Y228 551 aa20.16■□□□□ 0.82
SPSB3-207ENST00000565550 CCDC163A0A0D9SF12 145 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms