RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 B3GNT5Q9BYG0 378 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 RNF38Q9H0F5 515 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 DPEP3Q9H4B8 488 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ECT2Q9H8V3 914 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.83□□□□□ -1.329e-12■■■■■ 149.1
TCF4-228ENST00000565393 C2orf42Q9NWW7 574 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 SMPD4Q9NXE4 827 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 GCNT4Q9P109 453 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 MAPK8IP1Q9UQF2 711 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ATP6V1DQ9Y5K8 247 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 GTF3C3Q9Y5Q9 886 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 COL4A3Q01955 1670 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 MYO10Q9HD67 2058 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ATP8B3O60423 1300 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 GOLGA6L4A6NEF3 574 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 PRR5-ARHGAP8B1AHC4 643 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 K7ESF4 209 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 LEFTY2O00292 366 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 KLRC4O43908 158 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 RNF40O75150 1001 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 TADA3O75528 432 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 RTN3O95197 1032 aaPredicted RBP6.82□□□□□ -1.32
TCF4-228ENST00000565393 NFATC1O95644 943 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 STAU1O95793 577 aaKnown RBP6.82□□□□□ -1.32
TCF4-228ENST00000565393 NR3C1P04150 777 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 MYL1P05976 194 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 RETP07949 1114 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 CCDC192P0DO97 292 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 TDGF1P13385 188 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 KRT13P13646 458 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 TRIM21P19474 475 aaKnown RBP6.82□□□□□ -1.32
TCF4-228ENST00000565393 DRD1P21728 446 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 HOXC13P31276 330 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 RAP1GAPP47736 663 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 VAMP7P51809 220 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 NDUFA8P51970 172 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 NOP14P78316 857 aaKnown RBP6.82□□□□□ -1.32
TCF4-228ENST00000565393 ARHGAP8P85298 464 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 ADAM9Q13443 819 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 NCOA4Q13772 614 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 CCINQ13939 588 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 FBXO43Q4G163 708 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 WDR44Q5JSH3 913 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 SCARA5Q6ZMJ2 495 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 TTC30AQ86WT1 665 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 CAMKK1Q8N5S9 505 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 B3GALNT2Q8NCR0 500 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 RIN3Q8TB24 985 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 PLEKHO2Q8TD55 490 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 TMC2Q8TDI7 906 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 FBXO32Q969P5 355 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 CCDC34Q96HJ3 373 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 ZNF518BQ9C0D4 1074 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 ELOVL4Q9GZR5 314 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 NACA2Q9H009 215 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 XYLT2Q9H1B5 865 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 SMYD3Q9H7B4 428 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 MMRN2Q9H8L6 949 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 POLR3BQ9NW08 1133 aaPredicted RBP6.82□□□□□ -1.32
TCF4-228ENST00000565393 DMAC2Q9NW81 257 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 ARHGAP26Q9UNA1 814 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 CPQQ9Y646 472 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 VWA8A3KMH1 1905 aa6.82□□□□□ -1.32
TCF4-228ENST00000565393 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 DCDC2BA2VCK2 349 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 SLC9A3R1O14745 358 aaPredicted RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 SCAMP3O14828 347 aaKnown RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 IKBKBO14920 756 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 RPP40O75818 363 aaKnown RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 AP1G2O75843 785 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 ZNF202O95125 648 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 VNN1O95497 513 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 PRR29P0C7W0 189 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 MBL2P11226 248 aaPredicted RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 PFKLP17858 780 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 RPL13P26373 211 aaKnown RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 HOXA6P31267 233 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 PIK3CAP42336 1068 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 GCLMP48507 274 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 DGKEP52429 567 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 NDST1P52848 882 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 CACNA2D1P54289 1103 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 SEC13P55735 322 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 MAP3K7CLP57077 242 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 CLDN10P78369 228 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 ZXDBP98169 803 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 LMNB2Q03252 620 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 ORC1Q13415 861 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 ZNF77Q15935 545 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 EML3Q32P44 896 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 C2orf27AQ580R0 203 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 HECTD3Q5T447 861 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 NAIF1Q69YI7 327 aaPredicted RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 PKN3Q6P5Z2 889 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 KRBA2Q6ZNG9 492 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 SV2AQ7L0J3 742 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 CACNA2D4Q7Z3S7 1137 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 FILIP1Q7Z7B0 1213 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 WDR5BQ86VZ2 330 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 SLC9A9Q8IVB4 645 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms