RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 RTN3O95197 1032 aaPredicted RBP13.06□□□□□ -0.32
SPG7-211ENST00000565370 DCNP07585 359 aaKnown RBP13.06□□□□□ -0.32
SPG7-211ENST00000565370 PFKLP17858 780 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 KPNA1P52294 538 aaPredicted RBP13.06□□□□□ -0.32
SPG7-211ENST00000565370 NDST1P52848 882 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 CDH8P55286 799 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 INCA1Q0VD86 236 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 PAK1Q13153 545 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 ZNF268Q14587 947 aaPredicted RBP13.06□□□□□ -0.32
SPG7-211ENST00000565370 TXNDC8Q6A555 127 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 ANKRD40Q6AI12 368 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
SPG7-211ENST00000565370 TMEM150AQ86TG1 271 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 ACOT1Q86TX2 421 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 PDZD8Q8NEN9 1154 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 TTLL2Q9BWV7 592 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 NT5C1AQ9BXI3 368 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 SLC46A2Q9BY10 475 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 FAM124BQ9H5Z6 455 aaPredicted RBP13.06□□□□□ -0.32
SPG7-211ENST00000565370 C8orf33Q9H7E9 229 aaPredicted RBP13.06□□□□□ -0.32
SPG7-211ENST00000565370 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.06□□□□□ -0.32
SPG7-211ENST00000565370 CTNND2Q9UQB3 1225 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 NME7Q9Y5B8 376 aa13.06□□□□□ -0.32
SPG7-211ENST00000565370 PATJQ8NI35 1801 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 FAM170BA6NMN3 283 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 H0Y858 1186 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 BIN1O00499 593 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 PI15O43692 258 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 AP1G2O75843 785 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 FAM200BP0CF97 657 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 CD58P19256 250 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 MLLT6P55198 1093 aaPredicted RBP13.05□□□□□ -0.32
SPG7-211ENST00000565370 YWHAEP62258 255 aaKnown RBP13.05□□□□□ -0.32
SPG7-211ENST00000565370 IFRD2Q12894 506 aaPredicted RBP13.05□□□□□ -0.32
SPG7-211ENST00000565370 ANGPT1Q15389 498 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 ISM2Q6H9L7 571 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 FOXR2Q6PJQ5 311 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 OVCA2Q8WZ82 227 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 ELMO3Q96BJ8 720 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 RSPRY1Q96DX4 576 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 IER2Q9BTL4 223 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 B3GNT5Q9BYG0 378 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 SMG9Q9H0W8 520 aaKnown RBP13.05□□□□□ -0.32
SPG7-211ENST00000565370 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 FAM49BQ9NUQ9 324 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 FAM86C1Q9NVL1 165 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 NDRG2Q9UN36 371 aaKnown RBP13.05□□□□□ -0.32
SPG7-211ENST00000565370 MYO16Q9Y6X6 1858 aa13.05□□□□□ -0.32
SPG7-211ENST00000565370 ARNTLO00327 626 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 CLDN5O00501 218 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 FGFR1OPO95684 399 aaKnown RBP13.04□□□□□ -0.32
SPG7-211ENST00000565370 GNA14O95837 355 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 CCDC130P13994 396 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 TARSP26639 723 aaKnown RBP13.04□□□□□ -0.32
SPG7-211ENST00000565370 YWHAQP27348 245 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 SLC5A3P53794 718 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 PMS1P54277 932 aaKnown RBP13.04□□□□□ -0.32
SPG7-211ENST00000565370 CETN1Q12798 172 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 USP4Q13107 963 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 ORC1Q13415 861 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 MORC3Q14149 939 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 LRRC32Q14392 662 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 MTF1Q14872 753 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 PDGFRLQ15198 375 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
SPG7-211ENST00000565370 FRMD5Q7Z6J6 570 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 RALGPS2Q86X27 583 aaPredicted RBP13.04□□□□□ -0.32
SPG7-211ENST00000565370 NUP93Q8N1F7 819 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 CRYBG2Q8N1P7 616 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 TTC16Q8NEE8 873 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 FAM3CQ92520 227 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 USP13Q92995 863 aaPredicted RBP13.04□□□□□ -0.32
SPG7-211ENST00000565370 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 EXOC4Q96A65 974 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 APOBEC3GQ9HC16 384 aaKnown RBP13.04□□□□□ -0.32
SPG7-211ENST00000565370 HMGXB4Q9UGU5 601 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 COL4A3Q01955 1670 aa13.04□□□□□ -0.32
SPG7-211ENST00000565370 ANAPC1Q9H1A4 1944 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 MYH10P35580 1976 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 LAMTOR5O43504 91 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 CILPO75339 1184 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 ABL1P00519 1130 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 CD72P21854 359 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 TBXAS1P24557 533 aaPredicted RBP13.03□□□□□ -0.32
SPG7-211ENST00000565370 ADORA2BP29275 332 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 RPS9P46781 194 aaKnown RBP13.03□□□□□ -0.32
SPG7-211ENST00000565370 IFNAR2P48551 515 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 MCCD1P59942 119 aaPredicted RBP13.03□□□□□ -0.32
SPG7-211ENST00000565370 USP46P62068 366 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 AMPD2Q01433 879 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 PPP2R5DQ14738 602 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 ITPRIPL2Q3MIP1 535 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 CBWD6Q4V339 395 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 CBWD3Q5JTY5 395 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 CBWD5Q5RIA9 395 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 TTI2Q6NXR4 508 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 FILIP1Q7Z7B0 1213 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms