RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 APBA1Q02410 837 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 PTK2Q05397 1052 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 IFRD2Q12894 506 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-208ENST00000564703 SYCP1Q15431 976 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 CNGA2Q16280 664 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 GAREM2Q75VX8 874 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 NEK11Q8NG66 645 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 MRPS31Q92665 395 aaKnown RBP16.91■□□□□ 0.3
RAB40C-208ENST00000564703 NXPE3Q969Y0 559 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 SLITRK1Q96PX8 696 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 SMOQ99835 787 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 ANP32EQ9BTT0 268 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 FBXO44Q9H4M3 255 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 ZNF334Q9HCZ1 680 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-208ENST00000564703 SIX2Q9NPC8 291 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 FAM207AQ9NSI2 230 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-208ENST00000564703 COMMD8Q9NX08 183 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 TRPM5Q9NZQ8 1165 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 EPS15L1Q9UBC2 864 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 ZMYM5Q9UJ78 669 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 CNTN6Q9UQ52 1028 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 DAAM1Q9Y4D1 1078 aa16.91■□□□□ 0.3
RAB40C-208ENST00000564703 ABL1P00519 1130 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 UCHL3P15374 230 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 NPR3P17342 541 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 CEBPBP17676 345 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 CCR2P41597 374 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 CACNA2D1P54289 1103 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 DRAP1Q14919 205 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-208ENST00000564703 TEAD2Q15562 447 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 GPR158Q5T848 1215 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 MTSS1LQ765P7 747 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 TMC8Q8IU68 726 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 RNF135Q8IUD6 432 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 NPAS3Q8IXF0 933 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 STKLD1Q8NE28 680 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 SHKBP1Q8TBC3 707 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 UBXN6Q9BZV1 441 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
RAB40C-208ENST00000564703 IGSF9Q9P2J2 1179 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 TSPAN16Q9UKR8 245 aa16.9■□□□□ 0.3
RAB40C-208ENST00000564703 MYO10Q9HD67 2058 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 FOXN3O00409 490 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-208ENST00000564703 BEST1O76090 585 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 F11P03951 625 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 DDX6P26196 483 aaKnown RBP eCLIP16.89■□□□□ 0.29
RAB40C-208ENST00000564703 BCAT1P54687 386 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 UBASH3AP57075 661 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 POLR2FP61218 127 aaKnown RBP16.89■□□□□ 0.29
RAB40C-208ENST00000564703 GOLGA7BQ2TAP0 167 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 LCLAT1Q6UWP7 414 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 CLEC20AQ6ZU45 233 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 PDZD8Q8NEN9 1154 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 SHC3Q92529 594 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 FBXO32Q969P5 355 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 SPAG5Q96R06 1193 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 ERGIC2Q96RQ1 377 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 STK33Q9BYT3 514 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 TASP1Q9H6P5 420 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 IL21Q9HBE4 155 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 ZFP14Q9HCL3 533 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 PNPLA8Q9NP80 782 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 NOTCH4Q99466 2003 aa16.89■□□□□ 0.29
RAB40C-208ENST00000564703 PTPRDP23468 1912 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 SOBPA7XYQ1 873 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 O00370 1275 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 DPYSL4O14531 572 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 CYP26A1O43174 497 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 THAP12O43422 761 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 TPM3P06753 285 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 BRD2P25440 801 aaKnown RBP16.88■□□□□ 0.29
RAB40C-208ENST00000564703 GNA15P30679 374 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 SLC5A3P53794 718 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 ZNF445P59923 1031 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 FANCCQ00597 558 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 BST2Q10589 180 aaKnown RBP16.88■□□□□ 0.29
RAB40C-208ENST00000564703 TAF10Q12962 218 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 APTXQ7Z2E3 356 aaKnown RBP16.88■□□□□ 0.29
RAB40C-208ENST00000564703 CACNA2D4Q7Z3S7 1137 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 ZMIZ2Q8NF64 920 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 UBA3Q8TBC4 463 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 ZNF606Q8WXB4 792 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 TFAP2BQ92481 460 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 TTLL2Q9BWV7 592 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 COL25A1Q9BXS0 654 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-208ENST00000564703 PDCL3Q9H2J4 239 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 KCNK12Q9HB15 430 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 CD320Q9NPF0 282 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 TMEM30AQ9NV96 361 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 FHOD1Q9Y613 1164 aa16.88■□□□□ 0.29
RAB40C-208ENST00000564703 TNFRSF10AO00220 468 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 TNFRSF10BO14763 440 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 TEX33O43247 280 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 MOSPD3O75425 235 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 SETSIPP0DME0 302 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 KRT9P35527 623 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 AVPR1AP37288 418 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 KLK7P49862 253 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 PDE6CP51160 858 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 ZNF132P52740 706 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms