RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CPA4Q9UI42 421 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 PEG3Q9GZU2 1588 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 PPEF2O14830 753 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 MARCH6O60337 910 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 CSF1RP07333 972 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 MYCLP12524 364 aaPredicted RBP5.35□□□□□ -1.55
CHD9-212ENST00000564641 LAMB3Q13751 1172 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 SUPT20HL1Q3ZLR7 823 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 DAAM2Q86T65 1068 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 IZUMO1Q8IYV9 350 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 ABRAQ8N0Z2 381 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 TERB1Q8NA31 727 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 DIS3LQ8TF46 1054 aaKnown RBP5.35□□□□□ -1.55
CHD9-212ENST00000564641 AIFM3Q96NN9 605 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 FYTTD1Q96QD9 318 aaKnown RBP5.35□□□□□ -1.55
CHD9-212ENST00000564641 ARMT1Q9H993 441 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 NMRK2Q9NPI5 230 aa5.35□□□□□ -1.55
CHD9-212ENST00000564641 WDR17Q8IZU2 1322 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 A0A087WWL8 130 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 hCG_1984214I3L0E3 225 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 IKBKBO14920 756 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 KCNAB3O43448 404 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 PHKG2P15735 406 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 HSPA6P17066 643 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 DAZAP2Q15038 168 aaPredicted RBP5.34□□□□□ -1.55
CHD9-212ENST00000564641 L1TD1Q5T7N2 865 aaKnown RBP5.34□□□□□ -1.55
CHD9-212ENST00000564641 DEPDC1Q5TB30 811 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 PXDC1Q5TGL8 231 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 MIS18BP1Q6P0N0 1132 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 RAB11FIP4Q86YS3 637 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 DNAJC5GQ8N7S2 189 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 PLBD2Q8NHP8 589 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 HMCESQ96FZ2 354 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 RITA1Q96K30 269 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 C5orf34Q96MH7 638 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 ZNF48Q96MX3 618 aaPredicted RBP5.34□□□□□ -1.55
CHD9-212ENST00000564641 CAMKK2Q96RR4 588 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 CXorf36Q9H7Y0 433 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 ANLNQ9NQW6 1124 aa5.34□□□□□ -1.55
CHD9-212ENST00000564641 MRPS17Q9Y2R5 130 aaKnown RBP5.34□□□□□ -1.55
CHD9-212ENST00000564641 SMIM35A0A1B0GVV1 85 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 A0A1W2PPL8 197 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 BTBD19C9JJ37 291 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 PSMD9O00233 223 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 AP1G1O43747 822 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 EXOC3O60645 756 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 TOP3BO95985 862 aaKnown RBP5.33□□□□□ -1.56
CHD9-212ENST00000564641 KCNA3P22001 575 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 HTR1BP28222 390 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 CCT4P50991 539 aaKnown RBP5.33□□□□□ -1.56
CHD9-212ENST00000564641 ARFIP2P53365 341 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
CHD9-212ENST00000564641 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 ZNF813Q6ZN06 617 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 CAND1Q86VP6 1230 aaKnown RBP5.33□□□□□ -1.56
CHD9-212ENST00000564641 KRT73Q86Y46 540 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 SLC15A4Q8N697 577 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 SIRT6Q8N6T7 355 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 OR6B3Q8NGW1 331 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 PRSS3P2Q8NHM4 247 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 PIGOQ8TEQ8 1089 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 FAM118BQ9BPY3 351 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 MACROD1Q9BQ69 325 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 SH2D3AQ9BRG2 576 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 TRIM54Q9BYV2 358 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 VPS16Q9H269 839 aa5.33□□□□□ -1.56
CHD9-212ENST00000564641 KCNU1A8MYU2 1149 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 M0R3H8 397 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 BTN3A1O00481 513 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 ALDH1L1O75891 902 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 HMGB1P09429 215 aaKnown RBP5.32□□□□□ -1.56
CHD9-212ENST00000564641 NCLP19338 710 aaKnown RBP5.32□□□□□ -1.56
CHD9-212ENST00000564641 PRKAG1P54619 331 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 PIN1Q13526 163 aaPredicted RBP5.32□□□□□ -1.56
CHD9-212ENST00000564641 RAB32Q13637 225 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 CCNIQ14094 377 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 CERCAMQ5T4B2 595 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 DENND2CQ68D51 928 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 FCRL6Q6DN72 434 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 SERPINA13PQ6UXR4 307 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 ZNF280BQ86YH2 543 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 SFTPA1Q8IWL2 248 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 ADAMTS18Q8TE60 1221 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 ZBTB9Q96C00 473 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 LENG8Q96PV6 779 aaPredicted RBP5.32□□□□□ -1.56
CHD9-212ENST00000564641 P2RX7Q99572 595 aaKnown RBP5.32□□□□□ -1.56
CHD9-212ENST00000564641 DPH1Q9BZG8 443 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 CIPCQ9C0C6 399 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 AMFRQ9UKV5 643 aa5.32□□□□□ -1.56
CHD9-212ENST00000564641 TBC1D4O60343 1298 aa5.31□□□□□ -1.56
CHD9-212ENST00000564641 UBXN7O94888 489 aa5.31□□□□□ -1.56
CHD9-212ENST00000564641 CYP2A6P11509 494 aaPredicted RBP5.31□□□□□ -1.56
CHD9-212ENST00000564641 ZNF267Q14586 743 aaPredicted RBP5.31□□□□□ -1.56
CHD9-212ENST00000564641 PLA1AQ53H76 456 aa5.31□□□□□ -1.56
CHD9-212ENST00000564641 SLC2A7Q6PXP3 512 aa5.31□□□□□ -1.56
CHD9-212ENST00000564641 CNGA4Q8IV77 575 aa5.31□□□□□ -1.56
CHD9-212ENST00000564641 SPARTQ8N0X7 666 aa5.31□□□□□ -1.56
CHD9-212ENST00000564641 CELF5Q8N6W0 485 aaKnown RBP5.31□□□□□ -1.56
CHD9-212ENST00000564641 RHOBTB2Q9BYZ6 727 aa5.31□□□□□ -1.56
CHD9-212ENST00000564641 GABBR1Q9UBS5 961 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms