RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ANKRD16Q6P6B7 361 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 ZNF783Q6ZMS7 281 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 Q6ZWC4 215 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 SLC29A4Q7RTT9 530 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 KCTD20Q7Z5Y7 419 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 MICU3Q86XE3 530 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 CHPFQ8IZ52 775 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 ABRAQ8N0Z2 381 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 MPP5Q8N3R9 675 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 VGLL2Q8N8G2 317 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 FANCBQ8NB91 859 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 OR6B3Q8NGW1 331 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 CYP2W1Q8TAV3 490 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 BPIFB1Q8TDL5 484 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 SOCS4Q8WXH5 440 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 TSR2Q969E8 191 aaKnown RBP3.78□□□□□ -1.8
CHD9-211ENST00000564600 FSD1LQ9BXM9 530 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 TMEM60Q9H2L4 133 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 CNNM1Q9NRU3 951 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 L1RE1Q9UN81 338 aa3.78□□□□□ -1.8
CHD9-211ENST00000564600 G3BP2Q9UN86 482 aaKnown RBP3.78□□□□□ -1.8
CHD9-211ENST00000564600 MYO1CO00159 1063 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 QSOX1O00391 747 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 PHGDHO43175 533 aaKnown RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 JTBO76095 146 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 MPGP29372 298 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 LRPAP1P30533 357 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 SUMO3P55854 103 aaPredicted RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 WNT3P56703 355 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 GPSM2P81274 684 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 KRT17Q04695 432 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 GALEQ14376 348 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 PPP2R5AQ15172 486 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 EZH2Q15910 746 aaKnown RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 C3orf38Q5JPI3 329 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 CEP78Q5JTW2 689 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 AARS2Q5JTZ9 985 aaKnown RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 TEDDM1Q5T9Z0 273 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 PRAMEF17Q5VTA0 474 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 ZNF626Q68DY1 528 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 CXorf57Q6NSI4 855 aaKnown RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 PARS2Q7L3T8 475 aaKnown RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 PTF1AQ7RTS3 328 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 CAND1Q86VP6 1230 aaKnown RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 CHSY1Q86X52 802 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 SLC15A3Q8IY34 581 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 MAGEB6Q8N7X4 407 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 OSCP1Q8WVF1 389 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 JDP2Q8WYK2 163 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 TBC1D5Q92609 795 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 PPP2R3CQ969Q6 453 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 ZNF48Q96MX3 618 aaPredicted RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 MOGAT1Q96PD6 335 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 C17orf80Q9BSJ5 609 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 THAP7Q9BT49 309 aaPredicted RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 BRIP1Q9BX63 1249 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 QTRT1Q9BXR0 403 aaKnown RBP3.77□□□□□ -1.81
CHD9-211ENST00000564600 FLRT1Q9NZU1 646 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 LPAR3Q9UBY5 353 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 GABRQQ9UN88 632 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 ADAMTS5Q9UNA0 930 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 SH2B3Q9UQQ2 575 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 SHROOM4Q9ULL8 1493 aa3.77□□□□□ -1.81
CHD9-211ENST00000564600 CFAP69A5D8W1 941 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 CAPN8A6NHC0 703 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 AP4M1O00189 453 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 TRIM38O00635 465 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 ONECUT2O95948 504 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 IGKV2-30P06310 120 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 CYP2C9P11712 490 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 SFPQP23246 707 aaKnown RBP eCLIP3.76□□□□□ -1.81
CHD9-211ENST00000564600 PDE6CP51160 858 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 SSBP2P81877 361 aaPredicted RBP3.76□□□□□ -1.81
CHD9-211ENST00000564600 PSG6Q00889 435 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 E2F1Q01094 437 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 GRM1Q13255 1194 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 SUPT20HL1Q3ZLR7 823 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 RNASE12Q5GAN4 147 aaKnown RBP3.76□□□□□ -1.81
CHD9-211ENST00000564600 L1TD1Q5T7N2 865 aaKnown RBP3.76□□□□□ -1.81
CHD9-211ENST00000564600 NXNQ6DKJ4 435 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 FCRL6Q6DN72 434 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 SUMO4Q6EEV6 95 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 WDR53Q7Z5U6 358 aaPredicted RBP3.76□□□□□ -1.81
CHD9-211ENST00000564600 TCEAL8Q8IYN2 117 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 IZUMO1Q8IYV9 350 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 FAM156AQ8NDB6 213 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 DNAJB14Q8TBM8 379 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 PRR25Q96S07 402 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 BHMT2Q9H2M3 363 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 AS3MTQ9HBK9 375 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 CACNA1IQ9P0X4 2223 aa3.76□□□□□ -1.81
CHD9-211ENST00000564600 PRRT4C9JH25 899 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 FAM227AF5H4B4 570 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 H7C4K7 107 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 TSPAN6O43657 245 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 TBC1D4O60343 1298 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 S100BP04271 92 aaPredicted RBP3.75□□□□□ -1.81
CHD9-211ENST00000564600 PRR35P0CG20 571 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 CYP2D6P10635 497 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 FHL1Q13642 323 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms