RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ELOVL4Q9GZR5 314 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 DUS2Q9NX74 493 aaKnown RBP18.83■□□□□ 0.6
NME3-205ENST00000563854 TRPM5Q9NZQ8 1165 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 SMG5Q9UPR3 1016 aaKnown RBP18.83■□□□□ 0.6
NME3-205ENST00000563854 WNT6Q9Y6F9 365 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 PTPRDP23468 1912 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 ATP8B3O60423 1300 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 FAM186AA6NE01 2351 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 FAM237AA0A1B0GTK4 181 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 OTOL1A6NHN0 477 aaPredicted RBP18.82■□□□□ 0.6
NME3-205ENST00000563854 SOBPA7XYQ1 873 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 RHOBTB3O94955 611 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 HDCP19113 662 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 NR2F2P24468 414 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 NRLP54845 237 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 USP4Q13107 963 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 ORC1Q13415 861 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 BECN1Q14457 450 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 PDGFRLQ15198 375 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 ZNF77Q15935 545 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 HEATR6Q6AI08 1181 aaKnown RBP18.82■□□□□ 0.6
NME3-205ENST00000563854 SPEM1Q8N4L4 309 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 SUMF1Q8NBK3 374 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 SDCBP2Q9H190 292 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 MMRN2Q9H8L6 949 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 EHD2Q9NZN4 543 aa18.82■□□□□ 0.6
NME3-205ENST00000563854 RIF1Q5UIP0 2472 aaKnown RBP18.82■□□□□ 0.6
NME3-205ENST00000563854 ZNF202O95125 648 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 FAM163BP0C2L3 166 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 TRIM49P0CI25 452 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 TRIM49CP0CI26 452 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 P4HA1P13674 534 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 VAMP7P51809 220 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 CLDN10P78369 228 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 GRSF1Q12849 480 aaKnown RBP eCLIP18.81■□□□□ 0.6
NME3-205ENST00000563854 LPAL2Q16609 132 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 SPOPLQ6IQ16 392 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 FAM35AQ86V20 835 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 CPA6Q8N4T0 437 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 TMC2Q8TDI7 906 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 C8orf48Q96LL4 319 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 FAM126AQ9BYI3 521 aaPredicted RBP18.81■□□□□ 0.6
NME3-205ENST00000563854 VRTNQ9H8Y1 702 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 TMEM30AQ9NV96 361 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 GCNT4Q9P109 453 aa18.81■□□□□ 0.6
NME3-205ENST00000563854 GREB1Q4ZG55 1949 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 CHURC1-FNTBB4DL54 471 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 LILRB5O75023 590 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 TDGF1P13385 188 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 KRT13P13646 458 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 FNTBP49356 437 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 PDE6CP51160 858 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 TAF10Q12962 218 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 CCINQ13939 588 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 SGSM1Q2NKQ1 1148 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 ZACNQ401N2 412 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 NAIF1Q69YI7 327 aaPredicted RBP18.8■□□□□ 0.6
NME3-205ENST00000563854 SV2AQ7L0J3 742 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 ACOT1Q86TX2 421 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 SMYD4Q8IYR2 804 aaPredicted RBP18.8■□□□□ 0.6
NME3-205ENST00000563854 OSCP1Q8WVF1 389 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 NELL1Q92832 810 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 CCDC34Q96HJ3 373 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 TNIP3Q96KP6 325 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 CEP295NLQ96MC4 621 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 SLITRK1Q96PX8 696 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 TTLL2Q9BWV7 592 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 C2orf42Q9NWW7 574 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 SMPD4Q9NXE4 827 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 TRAF3IP3Q9Y228 551 aa18.8■□□□□ 0.6
NME3-205ENST00000563854 ANAPC1Q9H1A4 1944 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 GOLGA6L4A6NEF3 574 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 HLA-DRAP01903 254 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 NOP14P78316 857 aaKnown RBP18.79■□□□□ 0.6
NME3-205ENST00000563854 AMPD2Q01433 879 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 DMWDQ09019 674 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 FSTL4Q6MZW2 842 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 PRR23BQ6ZRT6 265 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 FAM186BQ8IYM0 893 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 ATP2A3Q93084 1043 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 FBXO32Q969P5 355 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 CHFRQ96EP1 664 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 EPC1Q9H2F5 836 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 ECT2Q9H8V3 914 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 KRT82Q9NSB4 513 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 HMGXB4Q9UGU5 601 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 RAB23Q9ULC3 237 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 ARHGAP26Q9UNA1 814 aa18.79■□□□□ 0.6
NME3-205ENST00000563854 HELZP42694 1942 aaKnown RBP18.78■□□□□ 0.6
NME3-205ENST00000563854 ZNF840PA6NDX5 716 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 SCAMP3O14828 347 aaKnown RBP18.78■□□□□ 0.6
NME3-205ENST00000563854 AP1G2O75843 785 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 AKAP3O75969 853 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 EGFP01133 1207 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 CCDC130P13994 396 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 GJA4P35212 333 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 GCLMP48507 274 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 NDST1P52848 882 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 PNOCQ13519 176 aa18.78■□□□□ 0.6
NME3-205ENST00000563854 TMEM196Q5HYL7 178 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms