RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 DRD1P21728 446 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 ANXA13P27216 316 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 GJA4P35212 333 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 FNTBP49356 437 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 USP46P62068 366 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 CYP27A1Q02318 531 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 DMWDQ09019 674 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 TRPC3Q13507 836 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 MDH1BQ5I0G3 518 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 WDR5BQ86VZ2 330 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 CPA6Q8N4T0 437 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 ARL14EPQ8N8R7 260 aaPredicted RBP18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 OR6B3Q8NGW1 331 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 ELOVL4Q9GZR5 314 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 KCTD10Q9H3F6 313 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 ECT2Q9H8V3 914 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 TRPC7Q9HCX4 862 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 DUS2Q9NX74 493 aaKnown RBP18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 TRPM5Q9NZQ8 1165 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 GMEB2Q9UKD1 530 aa18.36■□□□□ 0.53
VPS9D1-203ENST00000563798 CEP250Q9BV73 2442 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 ANAPC1Q9H1A4 1944 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 ZNF840PA6NDX5 716 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 PDXKO00764 312 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 LRP3O75074 770 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 OLFM2O95897 454 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 C4BPAP04003 597 aaKnown RBP18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 RETP07949 1114 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 PFKFB1P16118 471 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 SDHBP21912 280 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 GALK1P51570 392 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 KCNB1Q14721 858 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 EML3Q32P44 896 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 KMT5BQ4FZB7 885 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 FBXO43Q4G163 708 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 TDRD10Q5VZ19 366 aaKnown RBP18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 SH3RF2Q8TEC5 729 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 ATP2A3Q93084 1043 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 EXOC4Q96A65 974 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 EXOC1Q9NV70 894 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 RAB23Q9ULC3 237 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 ZDHHC9Q9Y397 364 aa18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 ZNF638Q14966 1978 aaKnown RBP18.35■□□□□ 0.53
VPS9D1-203ENST00000563798 LRRIQ3A6PVS8 624 aaPredicted RBP18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 A8MXQ7 604 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 PRR5-ARHGAP8B1AHC4 643 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 F8VP50 259 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 CASP4P49662 377 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 SLC7A9P82251 487 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 ARHGAP8P85298 464 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 LMNB2Q03252 620 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 SIM2Q14190 667 aaPredicted RBP18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 B3GALNT2Q8NCR0 500 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 TMC2Q8TDI7 906 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 P2RY13Q9BPV8 354 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 B3GNT5Q9BYG0 378 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 DPEP3Q9H4B8 488 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 FBRSL1Q9HCM7 1045 aaKnown RBP18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 TMEM30AQ9NV96 361 aa18.34■□□□□ 0.53
VPS9D1-203ENST00000563798 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 A0A1B0GVL5 298 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 PHACTR2O75167 634 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 IFNAR2P48551 515 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 CACNA2D1P54289 1103 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 ZXDBP98169 803 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 PKN3Q6P5Z2 889 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 DGLUCYQ7Z3D6 616 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 ZNF518BQ9C0D4 1074 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 PARD6AQ9NPB6 346 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 NXF1Q9UBU9 619 aaKnown RBP18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 TRAF3IP3Q9Y228 551 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 WNT6Q9Y6F9 365 aa18.33■□□□□ 0.52
VPS9D1-203ENST00000563798 IKBKBO14920 756 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 MAPK13O15264 365 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 VNN1O95497 513 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 OAS1P00973 400 aaKnown RBP18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 EGFP01133 1207 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 RPN1P04843 607 aaKnown RBP18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 KRT85P78386 507 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 NR1H3Q13133 447 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 BIRC3Q13489 604 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 NCOA4Q13772 614 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 NFIL3Q16649 462 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 RSPO4Q2I0M5 234 aaPredicted RBP18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 ZNF699Q32M78 642 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 ZACNQ401N2 412 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 ZNF667Q5HYK9 610 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 CAMKK1Q8N5S9 505 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 OVCA2Q8WZ82 227 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 TAF4BQ92750 862 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 CD101Q93033 1021 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 SPATA32Q96LK8 384 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 IL37Q9NZH6 218 aa18.32■□□□□ 0.52
VPS9D1-203ENST00000563798 RHOBTB3O94955 611 aa18.31■□□□□ 0.52
VPS9D1-203ENST00000563798 NR3C1P04150 777 aa18.31■□□□□ 0.52
VPS9D1-203ENST00000563798 MCCD1P59942 119 aaPredicted RBP18.31■□□□□ 0.52
VPS9D1-203ENST00000563798 ENPEPQ07075 957 aa18.31■□□□□ 0.52
VPS9D1-203ENST00000563798 TAF10Q12962 218 aa18.31■□□□□ 0.52
VPS9D1-203ENST00000563798 SGSM1Q2NKQ1 1148 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms