RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 LAG3P18627 525 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 SLC1A1P43005 524 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 SPATA2LQ8IUW3 424 aaPredicted RBP23.11■■□□□ 1.29
LINC01960-201ENST00000563759 SCUBE3Q8IX30 993 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 DCP1BQ8IZD4 617 aaKnown RBP23.11■■□□□ 1.29
LINC01960-201ENST00000563759 MNS1Q8NEH6 495 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 IGSF21Q96ID5 467 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 TTPALQ9BTX7 342 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 RHOBTB2Q9BYZ6 727 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 ZMYND8Q9ULU4 1186 aaPredicted RBP23.11■■□□□ 1.29
LINC01960-201ENST00000563759 MRPL42Q9Y6G3 142 aaKnown RBP23.11■■□□□ 1.29
LINC01960-201ENST00000563759 SLU7O95391 586 aaKnown RBP23.1■■□□□ 1.29
LINC01960-201ENST00000563759 BDNFP23560 247 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 EPHB4P54760 987 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 RTP2Q5QGT7 225 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 TMEM240Q5SV17 173 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 OLFML1Q6UWY5 402 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 UBL4BQ8N7F7 174 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 JOSD2Q8TAC2 188 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 COG1Q8WTW3 980 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 PIWIL1Q96J94 861 aaKnown RBP23.1■■□□□ 1.29
LINC01960-201ENST00000563759 ZBED2Q9BTP6 218 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 CARD6Q9BX69 1037 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 ZCWPW1Q9H0M4 648 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 LRRC4Q9HBW1 653 aa23.1■■□□□ 1.29
LINC01960-201ENST00000563759 PAPSS1O43252 624 aaPredicted RBP23.09■■□□□ 1.29
LINC01960-201ENST00000563759 GJB5O95377 273 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 RFC1P35251 1148 aaPredicted RBP23.09■■□□□ 1.29
LINC01960-201ENST00000563759 RPL34P49207 117 aaKnown RBP23.09■■□□□ 1.29
LINC01960-201ENST00000563759 ADIGQ0VDE8 80 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 ANKS3Q6ZW76 656 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 CPNE8Q86YQ8 564 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 EMC1Q8N766 993 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 TMEM169Q96HH4 297 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 SMOQ99835 787 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 USTQ9Y2C2 406 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 OR6C75A6NL08 312 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 H7C4K7 107 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 GABBR2O75899 941 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 MAN1A1P33908 653 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 RNASE9P60153 205 aaKnown RBP23.09■■□□□ 1.29
LINC01960-201ENST00000563759 SLC6A3Q01959 620 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 MRPL58Q14197 206 aaKnown RBP23.09■■□□□ 1.29
LINC01960-201ENST00000563759 CCDC181Q5TID7 509 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 SIX6OS1Q8N1H7 587 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 KCNK16Q96T55 309 aa23.09■■□□□ 1.29
LINC01960-201ENST00000563759 LBHD1Q9BQE6 289 aaPredicted RBP23.09■■□□□ 1.29
LINC01960-201ENST00000563759 DMAP1Q9NPF5 467 aaPredicted RBP23.09■■□□□ 1.29
LINC01960-201ENST00000563759 CXXC1Q9P0U4 656 aaPredicted RBP23.09■■□□□ 1.29
LINC01960-201ENST00000563759 CARNS1A5YM72 827 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 PSMA2P25787 234 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 CACNA2D1P54289 1103 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 CKAP4Q07065 602 aaKnown RBP23.08■■□□□ 1.29
LINC01960-201ENST00000563759 ZNF252P-AS1Q0IIN9 211 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 PIGHQ14442 188 aaPredicted RBP23.08■■□□□ 1.29
LINC01960-201ENST00000563759 NFE2Q16621 373 aaPredicted RBP23.08■■□□□ 1.29
LINC01960-201ENST00000563759 USP41Q3LFD5 358 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 CEP112Q8N8E3 955 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 COLGALT1Q8NBJ5 622 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 UBE2Q2Q8WVN8 375 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 KCTD13Q8WZ19 329 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 TMEM30AQ9NV96 361 aa23.08■■□□□ 1.29
LINC01960-201ENST00000563759 ABI2Q9NYB9 513 aaPredicted RBP23.08■■□□□ 1.29
LINC01960-201ENST00000563759 LAMA2P24043 3122 aaKnown RBP23.07■■□□□ 1.28
LINC01960-201ENST00000563759 DDX3YO15523 660 aaKnown RBP23.07■■□□□ 1.28
LINC01960-201ENST00000563759 GRAP2O75791 330 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 CPB1P15086 417 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 SSR1P43307 286 aaKnown RBP23.07■■□□□ 1.28
LINC01960-201ENST00000563759 OGDHQ02218 1023 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 TAS1R1Q7RTX1 841 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 SLC39A11Q8N1S5 342 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 ZMIZ2Q8NF64 920 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 FNIP1Q8TF40 1166 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 CLEC4CQ8WTT0 213 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 DPF3Q92784 378 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 CD101Q93033 1021 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 CSNK1G1Q9HCP0 422 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 CCDC66A2RUB6 948 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 CTNNA1P35221 906 aaKnown RBP23.07■■□□□ 1.28
LINC01960-201ENST00000563759 ARPP19P56211 112 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 DAB2IPQ5VWQ8 1189 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 KIAA1841Q6NSI8 718 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 MYRIPQ8NFW9 859 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 KRT35Q92764 455 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 PBKQ96KB5 322 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 SLC4A7Q9Y6M7 1214 aa23.07■■□□□ 1.28
LINC01960-201ENST00000563759 CES2O00748 559 aa23.06■■□□□ 1.28
LINC01960-201ENST00000563759 MARCKSL1P49006 195 aa23.06■■□□□ 1.28
LINC01960-201ENST00000563759 TKTL1P51854 596 aa23.06■■□□□ 1.28
LINC01960-201ENST00000563759 RABGGTBP53611 331 aa23.06■■□□□ 1.28
LINC01960-201ENST00000563759 CREG2Q8IUH2 290 aa23.06■■□□□ 1.28
LINC01960-201ENST00000563759 NIPA2Q8N8Q9 360 aa23.06■■□□□ 1.28
LINC01960-201ENST00000563759 SLC9A7Q96T83 725 aa23.06■■□□□ 1.28
LINC01960-201ENST00000563759 VN1R3Q9BXE9 311 aa23.06■■□□□ 1.28
LINC01960-201ENST00000563759 OXCT2Q9BYC2 517 aaPredicted RBP23.06■■□□□ 1.28
LINC01960-201ENST00000563759 MTIF3Q9H2K0 278 aaKnown RBP23.06■■□□□ 1.28
LINC01960-201ENST00000563759 CTNNA2P26232 953 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 HTRA4P83105 476 aaPredicted RBP23.05■■□□□ 1.28
LINC01960-201ENST00000563759 CFAP221Q4G0U5 840 aa23.05■■□□□ 1.28
LINC01960-201ENST00000563759 PRSS55Q6UWB4 352 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms